Factsheet for HORVU7Hr1G118740.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G118860.1	Barley	plastid	20.91	98.57
TraesCS7A01G543300.1	Wheat	nucleus	88.48	88.75
TraesCS7D01G529200.1	Wheat	nucleus	89.39	87.28
TraesCS7B01G465400.1	Wheat	nucleus	89.39	84.77
HORVU3Hr1G034540.16	Barley	plastid	66.97	74.41
Zm00001d036382_P001	Maize	nucleus	70.61	73.73
Zm00001d014814_P002	Maize	plastid	76.97	69.21
VIT_00s2739g00010.t01	Wine grape	cytosol	16.97	66.67
EER88977	Sorghum	plastid	74.24	64.14
HORVU7Hr1G062400.4	Barley	plastid	27.58	51.41
HORVU4Hr1G080890.1	Barley	nucleus	42.42	39.44
HORVU4Hr1G032690.2	Barley	nucleus, plastid	36.67	39.16
VIT_11s0037g01310.t01	Wine grape	cytosol	12.42	35.04
HORVU3Hr1G096460.5	Barley	nucleus	27.27	23.75
HORVU4Hr1G087590.1	Barley	nucleus	13.94	17.9
HORVU4Hr1G087610.1	Barley	nucleus	13.33	17.53
HORVU2Hr1G066000.7	Barley	nucleus	14.55	17.52
HORVU7Hr1G074490.3	Barley	nucleus	26.36	16.29
HORVU2Hr1G066100.1	Barley	cytosol, nucleus	14.55	15.74
HORVU3Hr1G005500.3	Barley	cytosol, nucleus	15.15	15.43
HORVU6Hr1G012760.1	Barley	nucleus	23.64	13.98
HORVU6Hr1G012730.1	Barley	nucleus	23.64	13.98
HORVU2Hr1G068960.2	Barley	nucleus	11.21	12.09
HORVU2Hr1G066090.2	Barley	cytosol	4.24	9.15

Protein Annotations

EnsemblPlants:HORVU7Hr1G118740.3	EnsemblPlantsGene:HORVU7Hr1G118740	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	ncoils:Coil
PANTHER:PTHR31945	PANTHER:PTHR31945:SF15	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000B479A8B	UniProt:A0A287XZ63	MapMan:15.5.32	:	:

Description

No Description!

Coordinates

chrchr7H:+:648286025..648288990

Molecular Weight (calculated)

35722.6 Da

IEP (calculated)

4.770

GRAVY (calculated)

-0.305

Length

330 amino acids

Sequence
(BLAST)

001: MELDEQAFLE ELFSLRRDAT AWECNAMGDF FSPACGAAAM GDCFQDRHQP TVSVLPTFTA SYDPQHQQHQ QAGVGFDCLS EVYGGATPFA NAVAGGYGEM
101: GFLGAMDPKA AAEGTAGLGA CKVEPGLAAG ADGGPFGQGQ MSAAPASRKK RVEGMPSKNL MAERRRRKRL NDRLSMLRSV VPKISKMDRT SILGDTIDYM
201: KELLERIRRL QEEMDGPEAA AAAAPLLSVF RELNPNEMLA RNTPKFEVER KEGEEGDTRV EIYCAAKPGL LLSTVSTLDT LGLDIQQCVV SCFNDFAMHA
301: SCSEMQREMM SADAIKQELF KNAGYGGGCL

Best Arabidopsis Sequence Match ( AT5G65640.1 )
(BLAST)

001: MELSTQMNVF EELLVPTKQE TTDNNINNLS FNGGFDHHHH QFFPNGYNID YLCFNNEEED ENTLLYPSSF MDLISQPPPL LLHQPPPLQP LSPPLSSSAT
101: AGATFDYPFL EALQEIIDSS SSSPPLILQN GQEENFNNPM SYPSPLMESD QSKSFSVGYC GGETNKKKSK KLEGQPSKNL MAERRRRKRL NDRLSMLRSI
201: VPKISKMDRT SILGDAIDYM KELLDKINKL QDEEQELGNS NNSHHSKLFG DLKDLNANEP LVRNSPKFEI DRRDEDTRVD ICCSPKPGLL LSTVNTLETL
301: GLEIEQCVIS CFSDFSLQAS CSEGAEQRDF ITSEDIKQAL FRNAGYGGSC L

Arabidopsis Description

BHLH93Transcription factor bHLH93 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSL1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.