Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37526 | Soybean | nucleus, plastid | 85.66 | 85.66 |
| KRH60862 | Soybean | nucleus | 32.56 | 41.79 |
| KRH02587 | Soybean | plastid | 37.21 | 39.67 |
| KRH19346 | Soybean | cytosol | 36.82 | 39.26 |
| KRH51545 | Soybean | cytosol | 24.03 | 38.75 |
| KRH06217 | Soybean | nucleus, plastid | 26.74 | 30.0 |
| KRH77291 | Soybean | mitochondrion | 21.71 | 28.72 |
| KRH47640 | Soybean | nucleus | 24.81 | 27.59 |
| KRH12644 | Soybean | nucleus | 19.77 | 25.37 |
| KRH37606 | Soybean | cytosol, nucleus, plastid | 20.16 | 25.24 |
| KRH19420 | Soybean | nucleus | 16.28 | 20.29 |
| KRH02523 | Soybean | cytosol | 13.57 | 17.77 |
| KRH28201 | Soybean | mitochondrion | 13.95 | 17.73 |
Protein Annotations
| EntrezGene:100812618 | MapMan:11.7.2.1.2 | MapMan:15.5.45 | EMBL:ACUP02009344 | InterPro:CCT_CS | EnsemblPlantsGene:GLYMA_15G179600 |
| GO:GO:0003674 | GO:GO:0003714 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009611 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0031347 | GO:GO:1903507 |
| GO:GO:2000022 | UniProt:I1MHH9 | InterPro:IPR010399 | EnsemblPlants:KRH12569 | ProteinID:KRH12569 | ProteinID:KRH12569.1 |
| PFAM:PF06200 | PFAM:PF09425 | PFscan:PS51320 | PANTHER:PTHR33077 | PANTHER:PTHR33077:SF13 | SMART:SM00979 |
| InterPro:Tify_dom | UniParc:UPI000233AEAF | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:17292780..17295404
Molecular Weight (calculated)
27652.5 Da
IEP (calculated)
9.268
GRAVY (calculated)
-0.422
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSSEYSEF SGQKPARSPE KSSFSQTCSL LSQYIKEKGS FGDLTLGMTS CGSPETSCQS ATTMNLFPPK ENNVAPKNLT AMDLLSPQAS SYGPSEEIPT
101: LVNSSAIKSV SKGAKTAQMT IFYGGQVVVF DDFPADKASE IMSYATKGGI PQSQNNSVYT YTQSQPSFPP TLIRTSADSS APIIPSVNIT NSIREHPQAS
201: SRPVVYLPIA RKASLHRFLE KRKDRIASKA PYQVANGPSN KAAESMPWLG LSASSPQI
101: LVNSSAIKSV SKGAKTAQMT IFYGGQVVVF DDFPADKASE IMSYATKGGI PQSQNNSVYT YTQSQPSFPP TLIRTSADSS APIIPSVNIT NSIREHPQAS
201: SRPVVYLPIA RKASLHRFLE KRKDRIASKA PYQVANGPSN KAAESMPWLG LSASSPQI
001: MSSSMECSEF VGSRRFTGKK PSFSQTCSRL SQYLKENGSF GDLSLGMACK PDVNGTLGNS RQPTTTMSLF PCEASNMDSM VQDVKPTNLF PRQPSFSSSS
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
Arabidopsis Description
TIFY10ATIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.