CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60862	Soybean	nucleus	85.62	68.16
KRH19346	Soybean	cytosol	53.12	35.12
KRH02587	Soybean	plastid	51.88	34.3
KRH77291	Soybean	mitochondrion	36.88	30.26
KRH37526	Soybean	nucleus, plastid	41.88	25.97
KRH12569	Soybean	nucleus	38.75	24.03
KRH47640	Soybean	nucleus	26.88	18.53
KRH37606	Soybean	cytosol, nucleus, plastid	23.75	18.45
KRH12644	Soybean	nucleus	23.12	18.41
KRH06217	Soybean	nucleus, plastid	25.0	17.39
KRH28201	Soybean	mitochondrion	21.88	17.24
KRH02523	Soybean	cytosol	19.38	15.74
KRH19420	Soybean	nucleus	18.75	14.49

Protein Annotations

EntrezGene:100778169	MapMan:11.7.2.1.2	MapMan:15.5.45	EMBL:ACUP02003380	InterPro:CCT_CS	EnsemblPlantsGene:GLYMA_06G013700
GO:GO:0003674	GO:GO:0003714	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009611	GO:GO:0009719	GO:GO:0009987	GO:GO:0031347	GO:GO:1903507
GO:GO:2000022	InterPro:IPR010399	UniProt:K7KSH5	EnsemblPlants:KRH51545	ProteinID:KRH51545	ProteinID:KRH51545.1
PFAM:PF06200	PFAM:PF09425	PFscan:PS51320	PANTHER:PTHR33077	PANTHER:PTHR33077:SF13	SMART:SM00979
InterPro:Tify_dom	UniParc:UPI000296000B	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:1019828..1020684

Molecular Weight (calculated)

17753.2 Da

IEP (calculated)

10.129

GRAVY (calculated)

-0.613

Length

160 amino acids

Sequence
(BLAST)

001: MELFPSIKAP TTMQSVYPRH LEIPTLVNPR SMEKEHKAAQ LTIFYNGQVV VFDDFPADKV QEMMSLALAT KGISQSQNSS AYAHTHNQQG NNHPSTIPNI
101: IPQAPSTPIA NDMPIGRKAS LHRFLEKRKD RIAAKAPYQT NRPISAPNKP AESLDAKSHT

Best Arabidopsis Sequence Match ( AT1G74950.1 )
(BLAST)

001: MSSFSAECWD FSGRKPSFSQ TCTRLSRYLK EKGSFGDLSL GMTCKPDVNG GSRQPTMMNL FPCEASGMDS SAGQEDIKPK TMFPRQSSFS SSSSSGTKED
101: VQMIKETTKS VKPESQSAPL TIFYGGRVMV FDDFSAEKAK EVIDLANKGS AKSFTCFTAE VNNNHSAYSQ KEIASSPNPV CSPAKTAAQE PIQPNPASLA
201: CELPIARRAS LHRFLEKRKD RITSKAPYQI DGSAEASSKP TNPAWLSSR

Arabidopsis Description

TIFY10BTIFY10B [Source:UniProtKB/TrEMBL;Acc:A0A178WA69]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.