Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- nucleus 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH51545 | Soybean | cytosol | 68.16 | 85.62 |
| KRH19346 | Soybean | cytosol | 53.73 | 44.63 |
| KRH02587 | Soybean | plastid | 53.23 | 44.21 |
| KRH37526 | Soybean | nucleus, plastid | 43.28 | 33.72 |
| KRH12569 | Soybean | nucleus | 41.79 | 32.56 |
| KRH77291 | Soybean | mitochondrion | 29.85 | 30.77 |
| KRH06217 | Soybean | nucleus, plastid | 29.85 | 26.09 |
| KRH47640 | Soybean | nucleus | 29.85 | 25.86 |
| KRH12644 | Soybean | nucleus | 22.89 | 22.89 |
| KRH37606 | Soybean | cytosol, nucleus, plastid | 22.39 | 21.84 |
| KRH02523 | Soybean | cytosol | 18.91 | 19.29 |
| KRH19420 | Soybean | nucleus | 18.41 | 17.87 |
| KRH28201 | Soybean | mitochondrion | 17.91 | 17.73 |
Protein Annotations
| EntrezGene:100807356 | MapMan:11.7.2.1.2 | MapMan:15.5.45 | EMBL:ACUP02002141 | InterPro:CCT_CS | EnsemblPlantsGene:GLYMA_04G013800 |
| GO:GO:0003674 | GO:GO:0003714 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009611 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0031347 | GO:GO:1903507 |
| GO:GO:2000022 | InterPro:IPR010399 | UniProt:K7KHK3 | EnsemblPlants:KRH60862 | ProteinID:KRH60862 | ProteinID:KRH60862.1 |
| PFAM:PF06200 | PFAM:PF09425 | PFscan:PS51320 | PANTHER:PTHR33077 | PANTHER:PTHR33077:SF13 | SMART:SM00979 |
| InterPro:Tify_dom | UniParc:UPI000233A6A0 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:1039833..1041793
Molecular Weight (calculated)
21935.9 Da
IEP (calculated)
8.817
GRAVY (calculated)
-0.493
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSLAEKST FSRTCTLLRQ YLKEKGSFGD LTLGIALPCT NGSPDTSCHS ATTMQSVYPR HLEIPTFINP SSTEKEAKAA QLTIFYDGQV VVFDDFPADK
101: VQEMMSLALA TKGISQSQNS SAYAQTHNQQ GNNHPSSIPN IIPQAPSTPI VNDMPIARKA SLHRFLEKRK DRIAAKSPYQ TNSPISAPNK QAESLDAKPH
201: I
101: VQEMMSLALA TKGISQSQNS SAYAQTHNQQ GNNHPSSIPN IIPQAPSTPI VNDMPIARKA SLHRFLEKRK DRIAAKSPYQ TNSPISAPNK QAESLDAKPH
201: I
001: MSSFSAECWD FSGRKPSFSQ TCTRLSRYLK EKGSFGDLSL GMTCKPDVNG GSRQPTMMNL FPCEASGMDS SAGQEDIKPK TMFPRQSSFS SSSSSGTKED
101: VQMIKETTKS VKPESQSAPL TIFYGGRVMV FDDFSAEKAK EVIDLANKGS AKSFTCFTAE VNNNHSAYSQ KEIASSPNPV CSPAKTAAQE PIQPNPASLA
201: CELPIARRAS LHRFLEKRKD RITSKAPYQI DGSAEASSKP TNPAWLSSR
101: VQMIKETTKS VKPESQSAPL TIFYGGRVMV FDDFSAEKAK EVIDLANKGS AKSFTCFTAE VNNNHSAYSQ KEIASSPNPV CSPAKTAAQE PIQPNPASLA
201: CELPIARRAS LHRFLEKRKD RITSKAPYQI DGSAEASSKP TNPAWLSSR
Arabidopsis Description
TIFY10BTIFY10B [Source:UniProtKB/TrEMBL;Acc:A0A178WA69]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.