Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77291 | Soybean | mitochondrion | 48.28 | 50.26 |
| KRH51545 | Soybean | cytosol | 17.24 | 21.88 |
| KRH60862 | Soybean | nucleus | 17.73 | 17.91 |
| KRH12644 | Soybean | nucleus | 15.76 | 15.92 |
| KRH37606 | Soybean | cytosol, nucleus, plastid | 15.76 | 15.53 |
| KRH19346 | Soybean | cytosol | 18.23 | 15.29 |
| KRH02587 | Soybean | plastid | 17.24 | 14.46 |
| KRH37526 | Soybean | nucleus, plastid | 18.23 | 14.34 |
| KRH12569 | Soybean | nucleus | 17.73 | 13.95 |
| KRH06217 | Soybean | nucleus, plastid | 13.79 | 12.17 |
| KRH47640 | Soybean | nucleus | 13.79 | 12.07 |
| KRH02523 | Soybean | cytosol | 11.33 | 11.68 |
| KRH19420 | Soybean | nucleus | 10.34 | 10.14 |
Protein Annotations
| EntrezGene:100306332 | MapMan:15.5.45 | EMBL:ACUP02006741 | EnsemblPlantsGene:GLYMA_11G038600 | GO:GO:0003674 | GO:GO:0003714 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009611 |
| GO:GO:0009719 | GO:GO:0009987 | GO:GO:0031347 | GO:GO:1903507 | GO:GO:2000022 | UniProt:I1LGV3 |
| InterPro:IPR010399 | EnsemblPlants:KRH28201 | ProteinID:KRH28201 | ProteinID:KRH28201.1 | PFAM:PF06200 | PFscan:PS51320 |
| PANTHER:PTHR33077 | PANTHER:PTHR33077:SF13 | SMART:SM00979 | InterPro:Tify_dom | UniParc:UPI00023CE562 | : |
Description
hypothetical protein
Coordinates
chr11:+:2759949..2761506
Molecular Weight (calculated)
23027.8 Da
IEP (calculated)
9.160
GRAVY (calculated)
-0.198
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPWNMRTSK LLSQQVSYPP YLFVEEIPNM GNSSVVTKDA RGSQLTIFYG GQVLVFDDIQ AKKAKDILSF AGKGMSQNQN DYANTFPATT SANPTRPFPF
101: LMNIIPTSAN NSVQDHPQAP SKPVICGNFF GSLMFIQKMM RDLCVGLCDS DPSRFVFLFV QIYHWLGKLH FIGSWRKERI ELLPEHHIKQ AITWQPLISQ
201: LNP
101: LMNIIPTSAN NSVQDHPQAP SKPVICGNFF GSLMFIQKMM RDLCVGLCDS DPSRFVFLFV QIYHWLGKLH FIGSWRKERI ELLPEHHIKQ AITWQPLISQ
201: LNP
001: MSLFPCEASN MDSMVQDVKP TNLFPRQPSF SSSSSSLPKE DVLKMTQTTR SVKPESQTAP LTIFYAGQVI VFNDFSAEKA KEVINLASKG TANSLAKNQT
101: DIRSNIATIA NQVPHPRKTT TQEPIQSSPT PLTELPIARR ASLHRFLEKR KDRVTSKAPY QLCDPAKASS NPQTTGNMSW LGLAAEI
101: DIRSNIATIA NQVPHPRKTT TQEPIQSSPT PLTELPIARR ASLHRFLEKR KDRVTSKAPY QLCDPAKASS NPQTTGNMSW LGLAAEI
Arabidopsis Description
TIFY10ATIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.