CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02587	Soybean	plastid	89.67	89.67
KRH60862	Soybean	nucleus	44.63	53.73
KRH51545	Soybean	cytosol	35.12	53.12
KRH37526	Soybean	nucleus, plastid	41.32	38.76
KRH12569	Soybean	nucleus	39.26	36.82
KRH77291	Soybean	mitochondrion	27.27	33.85
KRH47640	Soybean	nucleus	27.69	28.88
KRH06217	Soybean	nucleus, plastid	26.45	27.83
KRH37606	Soybean	cytosol, nucleus, plastid	17.77	20.87
KRH12644	Soybean	nucleus	16.94	20.4
KRH28201	Soybean	mitochondrion	15.29	18.23
KRH19420	Soybean	nucleus	15.29	17.87
KRH02523	Soybean	cytosol	12.81	15.74

Protein Annotations

EntrezGene:100802800	MapMan:11.7.2.1.2	MapMan:15.5.45	EMBL:ACUP02008176	InterPro:CCT_CS	EnsemblPlantsGene:GLYMA_13G112000
GO:GO:0003674	GO:GO:0003714	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009611	GO:GO:0009719	GO:GO:0009987	GO:GO:0031347	GO:GO:1903507
GO:GO:2000022	UniProt:I1LY77	InterPro:IPR010399	EnsemblPlants:KRH19346	ProteinID:KRH19346	ProteinID:KRH19346.1
EMBL:KT031246	PFAM:PF06200	PFAM:PF09425	PFscan:PS51320	PANTHER:PTHR33077	PANTHER:PTHR33077:SF13
SMART:SM00979	InterPro:Tify_dom	UniParc:UPI000233BD85	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:22541686..22545311

Molecular Weight (calculated)

26293.9 Da

IEP (calculated)

8.016

GRAVY (calculated)

-0.397

Length

242 amino acids

Sequence
(BLAST)

001: MSSSSEYLVF SGHHPANSPA EKSTFSQTCS LLSQYIKEKG TFGDLTLGMT CTAETNGSPE TSCHSATTME LFPTIITQRN PTTVDFLSPQ TAYPHHSEVP
101: IMVKSSAFKS MEKEPKAAQL TIFYAGQVVV FDDFPAEKLE EITSLAGKGI SQSQNTSAYA HTHNQQVNHP SFVPNISPQA PSRPLVCDLP IARKASLHRF
201: LSKRKDRIAA KAPYQINNPN SASSKPAESM SWLGLGAQST QV

Best Arabidopsis Sequence Match ( AT1G19180.3 )
(BLAST)

001: MSSSMECSEF VGSRRFTGKK PSFSQTCSRL SQYLKENGSF GDLSLGMACK PDVNGTLGNS RQPTTTMSLF PCEASNMDSM VQDVKPTNLF PRQPSFSSSS
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI

Arabidopsis Description

TIFY10ATIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.