Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG90949 | Soybean | nucleus | 83.99 | 83.48 |
| KXG32043 | Sorghum | nucleus | 33.23 | 39.86 |
| CDY37345 | Canola | nucleus | 27.79 | 39.83 |
| CDX77806 | Canola | nucleus | 17.82 | 39.33 |
| PGSC0003DMT400078368 | Potato | nucleus | 39.27 | 39.04 |
| CDY40403 | Canola | nucleus | 27.19 | 38.79 |
| VIT_01s0011g04510.t01 | Wine grape | endoplasmic reticulum, nucleus, vacuole | 45.92 | 38.68 |
| CDY37340 | Canola | nucleus | 26.59 | 38.1 |
| TraesCS3A01G024900.1 | Wheat | nucleus | 29.91 | 38.08 |
| Zm00001d008500_P001 | Maize | nucleus | 31.42 | 37.82 |
| Solyc05g008440.1.1 | Tomato | nucleus | 37.46 | 37.69 |
| HORVU3Hr1G006250.1 | Barley | nucleus | 29.31 | 37.45 |
| TraesCS3B01G019900.1 | Wheat | nucleus | 29.31 | 37.31 |
| TraesCS3D01G021200.1 | Wheat | nucleus | 26.59 | 37.29 |
| Os01t0120700-01 | Rice | nucleus | 32.02 | 37.19 |
| Bra014343.1-P | Field mustard | nucleus | 25.68 | 36.8 |
| Bra024906.1-P | Field mustard | nucleus | 25.38 | 36.52 |
| Zm00001d040118_P001 | Maize | nucleus | 27.19 | 36.44 |
| CDY17697 | Canola | nucleus | 24.77 | 35.65 |
| AT2G01100.3 | Thale cress | nucleus | 26.59 | 35.63 |
Protein Annotations
| EMBL:ACUP02006703 | EnsemblPlants:KRH35818 | EnsemblPlantsGene:GLYMA_10G266900 | EntrezGene:100795990 | ncoils:Coil | PANTHER:PTHR37715 |
| ProteinID:KRH35817.1 | ProteinID:KRH35818 | ProteinID:KRH35818.1 | SEG:seg | UniParc:UPI000233CF6C | UniProt:I1LEN8 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:49011596..49015246
Molecular Weight (calculated)
39314.7 Da
IEP (calculated)
10.601
GRAVY (calculated)
-2.187
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAKRFIQLV EEKKKKIMER KEAPLKWEQK LEAAAETKER KLKATKHKKR SGSDSDSDND SDDESRKTSK RSHRKHRKHS HYDSGDHEKR KEKSSKRKTK
101: KSSSETSDYD DFESSSEEER RKKKQSKKLR DRGSRSDSSD SDSIADELSK RKRHHKRQRP SKFSGSDYST EEGDSLVRKR NHGKHSKRHR RSESSESDLS
201: SDDAPRKKGH RKHQKHHKRS HNVELRSSDS DYHHSHGQRS RSKSLEENSE DESKRSMHKK SDRHHHHHRH HHHHHHKHRH HLDDERNHMQ QHSPKFNGKH
301: DEKLDKTETD KKDGGHHESR AMVENNDGQI V
101: KSSSETSDYD DFESSSEEER RKKKQSKKLR DRGSRSDSSD SDSIADELSK RKRHHKRQRP SKFSGSDYST EEGDSLVRKR NHGKHSKRHR RSESSESDLS
201: SDDAPRKKGH RKHQKHHKRS HNVELRSSDS DYHHSHGQRS RSKSLEENSE DESKRSMHKK SDRHHHHHRH HHHHHHKHRH HLDDERNHMQ QHSPKFNGKH
301: DEKLDKTETD KKDGGHHESR AMVENNDGQI V
001: MDCKKFIQMV EEKKRRVLEK QEAPLKWEQK LEAAANAKAD TETKVKRSKG PKRKQRAASE SSSESDSSSE VRRKSRRSHN KHRRHAHSDS DDSDRRKEKK
101: SRRQKRRSLS PSDDSTGDYE SGSEDELRMK IKHHRRHKWH SSRKTCDDDS TEDVRRKHLK HHRRSEVVTS SDSEEESGRR RRGKYHRHNR GSASSSGSEE
201: DSGKSMKRRQ HKRHRLAESS SEEDGAMRRT RHHKHGRDSA SESDGRR
101: SRRQKRRSLS PSDDSTGDYE SGSEDELRMK IKHHRRHKWH SSRKTCDDDS TEDVRRKHLK HHRRSEVVTS SDSEEESGRR RRGKYHRHNR GSASSSGSEE
201: DSGKSMKRRQ HKRHRLAESS SEEDGAMRRT RHHKHGRDSA SESDGRR
Arabidopsis Description
AT2G01100 protein [Source:UniProtKB/TrEMBL;Acc:Q9SJV6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.