Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- plasma membrane 4
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH12050 | Soybean | plasma membrane | 91.62 | 91.62 |
| VIT_05s0020g01510.t01 | Wine grape | plasma membrane | 52.1 | 51.79 |
| KRH68170 | Soybean | cytosol, endoplasmic reticulum, plasma membrane, plastid | 43.71 | 39.46 |
| Zm00001d010856_P001 | Maize | plastid | 30.54 | 27.13 |
| TraesCS1B01G121200.1 | Wheat | cytosol | 31.74 | 27.04 |
| TraesCS1A01G093000.1 | Wheat | plastid | 31.14 | 26.53 |
| TraesCS1D01G101700.1 | Wheat | cytosol, plastid | 31.14 | 26.53 |
| Zm00001d035803_P001 | Maize | plastid | 30.54 | 26.42 |
| Os05t0151200-01 | Rice | plastid | 29.94 | 25.91 |
| HORVU1Hr1G021750.2 | Barley | cytosol, plastid | 28.14 | 23.62 |
| EES17723 | Sorghum | plastid | 29.34 | 23.45 |
| GSMUA_Achr8P06680_001 | Banana | golgi, peroxisome, plasma membrane | 39.52 | 14.01 |
Protein Annotations
| Gene3D:1.20.1260.100 | EntrezGene:100790873 | MapMan:19.3.4.1 | EMBL:ACUP02005414 | EnsemblPlantsGene:GLYMA_09G044900 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | UniProt:I1L102 | InterPro:IPR038330 | EnsemblPlants:KRH37113 | ProteinID:KRH37113 |
| ProteinID:KRH37113.1 | PFAM:PF03073 | PIRSF:PIRSF005859 | PANTHER:PTHR10057 | PANTHER:PTHR10057:SF6 | TMHMM:TMhelix |
| InterPro:TspO/MBR-related_sf | InterPro:TspO_MBR | UniParc:UPI000233C901 | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:3847516..3848019
Molecular Weight (calculated)
18824.6 Da
IEP (calculated)
10.147
GRAVY (calculated)
0.831
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQTLHDTK KSQARRALRS LAIGIAVPFT LTLTIIILFG SGRKYNQIIS KPFWFAPLWF IHLSILGSSF FMGLAAWLVW ADGGFQGETD AMSLYIAHVS
101: LSIVWHPLVL VMGAYWLALI SCLVNFVTLF LCYLRFRKVN PFAKDLAKPC LAWAAYLCLV SFKLIFI
101: LSIVWHPLVL VMGAYWLALI SCLVNFVTLF LCYLRFRKVN PFAKDLAKPC LAWAAYLCLV SFKLIFI
001: MDSQDIRYRG GDDRDAATTA MAETERKSAD DNKGKRDQKR AMAKRGLKSL TVAVAAPVLV TLFATYFLGT SDGYGNRAKS SSWIPPLWLL HTTCLASSGL
101: MGLAAWLVWV DGGFHKKPNA LYLYLAQFLL CLVWDPVTFR VGSGVAGLAV WLGQSAALFG CYKAFNEISP VAGNLVKPCL AWAAFVAAVN VKLAVA
101: MGLAAWLVWV DGGFHKKPNA LYLYLAQFLL CLVWDPVTFR VGSGVAGLAV WLGQSAALFG CYKAFNEISP VAGNLVKPCL AWAAFVAAVN VKLAVA
Arabidopsis Description
TSPOTSPO [Source:UniProtKB/TrEMBL;Acc:A0A178W1Q1]
SUBAcon: [golgi,peroxisome,vacuole]
SUBAcon: [golgi,peroxisome,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.