CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 2
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010856_P001	Maize	plastid	66.51	73.94
Zm00001d035803_P001	Maize	plastid	65.55	70.98
Os05t0151200-01	Rice	plastid	56.46	61.14
TraesCS1D01G101700.1	Wheat	cytosol, plastid	52.63	56.12
TraesCS1A01G093000.1	Wheat	plastid	52.15	55.61
TraesCS1B01G121200.1	Wheat	cytosol	51.67	55.1
HORVU1Hr1G021750.2	Barley	cytosol, plastid	49.28	51.76
VIT_07s0005g00140.t01	Wine grape	plastid	31.58	35.68
KRH68170	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	30.62	34.59
Solyc09g074910.1.1	Tomato	golgi, peroxisome, plasma membrane	28.71	30.3
PGSC0003DMT400085629	Potato	golgi, peroxisome, plasma membrane	28.71	29.56
KRH37113	Soybean	plasma membrane	23.45	29.34
Bra004430.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	24.88	29.21
CDY53019	Canola	endoplasmic reticulum, nucleus, plasma membrane	25.36	29.12
AT2G47770.1	Thale cress	golgi, peroxisome, vacuole	27.27	29.08
CDX80134	Canola	endoplasmic reticulum, peroxisome, plasma membrane	24.4	28.65
CDY55531	Canola	golgi, peroxisome, plasma membrane	26.79	28.57
Bra021442.1-P	Field mustard	golgi, peroxisome, plasma membrane	26.79	28.57
VIT_05s0020g01510.t01	Wine grape	plasma membrane	22.49	27.98
CDY27471	Canola	golgi, peroxisome, plasma membrane	25.36	27.18
KRH12050	Soybean	plasma membrane	21.53	26.95
GSMUA_Achr8P06680_001	Banana	golgi, peroxisome, plasma membrane	32.06	14.23

Protein Annotations

EnsemblPlants:EES17723	EnsemblPlantsGene:SORBI_3009G046200	EntrezGene:8075985	Gene3D:1.20.1260.100	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:IPR038330	InterPro:PTS_HPr_His_P_site	InterPro:TspO/MBR-related_sf	InterPro:TspO_MBR	PANTHER:PTHR10057
PANTHER:PTHR10057:SF0	PFAM:PF03073	ProteinID:EES17723	ProteinID:EES17723.1	RefSeq:XP_002439293.1	ScanProsite:PS00369
SEG:seg	TMHMM:TMhelix	UniParc:UPI0001A8876E	UniProt:C5Z056	MapMan:19.3.4.1	:

Description

hypothetical protein

Coordinates

chr9:+:4398325..4399917

Molecular Weight (calculated)

19948.8 Da

IEP (calculated)

10.846

GRAVY (calculated)

0.449

Length

209 amino acids

Sequence
(BLAST)

001: MAAAAHEGMT HRVATSRNDG GGSDAAAVSG PNKKPGGGGG GGGGGRVSSS SSSSSRRGLR SLAAAVSLSA ALTALSFFFA AGGGHSSSSP PSASTTTVAM
101: VRAGSVASEA VLALAAWMAW AEGGVHARPA ATLLPYAAQL GAALAWAPLV LGQGHAAAPR AGLACCAAMA AAAVACARGF GAVNPVAGDL AKPAVAWAVI
201: LAVVNYKML

Best Arabidopsis Sequence Match ( AT2G47770.1 )
(BLAST)

001: MDSQDIRYRG GDDRDAATTA MAETERKSAD DNKGKRDQKR AMAKRGLKSL TVAVAAPVLV TLFATYFLGT SDGYGNRAKS SSWIPPLWLL HTTCLASSGL
101: MGLAAWLVWV DGGFHKKPNA LYLYLAQFLL CLVWDPVTFR VGSGVAGLAV WLGQSAALFG CYKAFNEISP VAGNLVKPCL AWAAFVAAVN VKLAVA

Arabidopsis Description

TSPOTSPO [Source:UniProtKB/TrEMBL;Acc:A0A178W1Q1]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.