Factsheet for AT2G47770.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, vacuole

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, vacuole
Any Predictor:	golgi, nucleus, peroxisome, vacuole
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021442.1-P	Field mustard	golgi, peroxisome, plasma membrane	82.14	82.14
CDY55531	Canola	golgi, peroxisome, plasma membrane	82.14	82.14
CDY27471	Canola	golgi, peroxisome, plasma membrane	81.12	81.54
CDY53019	Canola	endoplasmic reticulum, nucleus, plasma membrane	74.49	80.22
Bra004430.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	69.39	76.4
CDX80134	Canola	endoplasmic reticulum, peroxisome, plasma membrane	67.86	74.72
VIT_07s0005g00140.t01	Wine grape	plastid	46.94	49.73
KRH68170	Soybean	cytosol, endoplasmic reticulum, plasma membrane, plastid	40.82	43.24
Solyc09g074910.1.1	Tomato	golgi, peroxisome, plasma membrane	40.31	39.9
PGSC0003DMT400085629	Potato	golgi, peroxisome, plasma membrane	39.29	37.93
TraesCS1B01G121200.1	Wheat	cytosol	33.16	33.16
TraesCS1A01G093000.1	Wheat	plastid	32.65	32.65
TraesCS1D01G101700.1	Wheat	cytosol, plastid	32.65	32.65
HORVU1Hr1G021750.2	Barley	cytosol, plastid	31.63	31.16
Os05t0151200-01	Rice	plastid	29.59	30.05
Zm00001d035803_P001	Maize	plastid	27.55	27.98
EES17723	Sorghum	plastid	29.08	27.27
Zm00001d010856_P001	Maize	plastid	25.0	26.06
GSMUA_Achr8P06680_001	Banana	golgi, peroxisome, plasma membrane	36.73	15.29

Protein Annotations

Gene3D:1.20.1260.100	MapMan:19.3.4.1	EntrezGene:819389	UniProt:A0A178W1Q1	ProteinID:AAC63632.1	ProteinID:AEC10886.1
EMBL:AF428356	ArrayExpress:AT2G47770	EnsemblPlantsGene:AT2G47770	RefSeq:AT2G47770	TAIR:AT2G47770	RefSeq:AT2G47770-TAIR-G
EnsemblPlants:AT2G47770.1	TAIR:AT2G47770.1	Symbol:ATTSPO	EMBL:AY045981	EMBL:AY079391	Unigene:At.23206
GO:GO:0000139	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0005794	GO:GO:0005795	GO:GO:0006778
GO:GO:0006950	GO:GO:0006970	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536
GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0020037	GO:GO:0031969	InterPro:IPR038330	RefSeq:NP_566110.1	UniProt:O82245
ProteinID:OAP11263.1	PFAM:PF03073	PIRSF:PIRSF005859	PO:PO:0000084	PO:PO:0001016	PO:PO:0001017
PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0025022
PO:PO:0025195	PO:PO:0025281	PANTHER:PTHR10057	PANTHER:PTHR10057:SF6	TMHMM:TMhelix	InterPro:TspO/MBR-related_sf
InterPro:TspO_MBR	UniParc:UPI000009CED8	SEG:seg	:	:	:

Description

TSPOTSPO [Source:UniProtKB/TrEMBL;Acc:A0A178W1Q1]

Coordinates

chr2:+:19568464..19569507

Molecular Weight (calculated)

21063.5 Da

IEP (calculated)

9.644

GRAVY (calculated)

0.223

Length

196 amino acids

Sequence
(BLAST)

001: MDSQDIRYRG GDDRDAATTA MAETERKSAD DNKGKRDQKR AMAKRGLKSL TVAVAAPVLV TLFATYFLGT SDGYGNRAKS SSWIPPLWLL HTTCLASSGL
101: MGLAAWLVWV DGGFHKKPNA LYLYLAQFLL CLVWDPVTFR VGSGVAGLAV WLGQSAALFG CYKAFNEISP VAGNLVKPCL AWAAFVAAVN VKLAVA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.