Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47201 | Soybean | nucleus | 92.61 | 92.61 |
| Solyc06g066470.2.1 | Tomato | nucleus | 51.7 | 76.96 |
| PGSC0003DMT400042602 | Potato | cytosol, nucleus, peroxisome | 36.79 | 75.73 |
| VIT_09s0002g03380.t01 | Wine grape | cytosol | 67.9 | 63.23 |
| CDY69371 | Canola | cytosol | 7.53 | 63.1 |
| KRH62113 | Soybean | nucleus | 57.67 | 55.77 |
| KRH52804 | Soybean | nucleus | 57.39 | 55.19 |
| KRH39125 | Soybean | nucleus | 49.57 | 46.1 |
| KRH48590 | Soybean | nucleus | 48.58 | 45.18 |
| KRH60473 | Soybean | cytosol | 34.09 | 40.27 |
Protein Annotations
| Gene3D:1.10.1410.10 | EntrezGene:100783237 | MapMan:16.2.1.1.1 | Gene3D:3.30.460.10 | Gene3D:3.30.70.590 | EMBL:ACUP02004925 |
| EnsemblPlantsGene:GLYMA_08G200500 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004652 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006378 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016779 |
| GO:GO:0031123 | GO:GO:0043631 | UniProt:I1KV14 | EnsemblPlants:KRH44269 | ProteinID:KRH44269 | ProteinID:KRH44269.1 |
| InterPro:NuclTrfase_I-like_C | PFAM:PF01909 | PFAM:PF04926 | PFAM:PF04928 | PANTHER:PTHR10682 | PANTHER:PTHR10682:SF22 |
| InterPro:PolA_pol_RNA-bd_dom | InterPro:PolA_pol_cen_dom | InterPro:PolyA_polymerase | InterPro:Polymerase_NTP_transf_dom | SUPFAM:SSF55003 | SUPFAM:SSF81301 |
| SUPFAM:SSF81631 | UniParc:UPI0002960D49 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:16216202..16221421
Molecular Weight (calculated)
79762.0 Da
IEP (calculated)
6.431
GRAVY (calculated)
-0.355
Length
704 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSEGVGAS SKQFGVTKPI SMAGPTVTDL QRTRELEKFL AVSGLYESKE EAAKREEVLH RLGEIVKNWV KQLTRLRGYT DQMVEDANAV ILTFGSYRLG
101: VHGPGADLDT LCIGPSYVNR EEDFFYTLHD ILANIEEVTE LQPIPDAHVP VMKFKFDGIS IDLLYASISR LIVPEDLDIS DVSVLHNVDE PTVRSLNGCR
201: VADQILKLVP NVEHFRTTLR CLKFWAKRRG IYSNVTGFLG GVNLALLVAR VCQFYPKAVP SMLVSRFFRV YTQWRWPTPV MLCPIEENDL GFPVWHPGKN
301: PRDRSHHMPI ITPAYPCMNS SYNVSMSTLR VMMEQFQYGN KICGEIELSK DCWKALFEKY SFFESYKNYL QVDVVAADAD DLRSWKGWVE SRLRQLTLMI
401: ERDTFGKLQC HPYHHEFVDT SRQCAHCAFF MGLHRKEGEV VQEGQQFDIR GTVEEFRHSV NMYMFWKPGM EIYVSHVRRR QIPCYVFPDG YKRSRPSRPT
501: SQFENCKSFH NNEVSVTEHV ERIRKRKNND GVDVREDAIV KRQYACPPGD RLARRNSLGT GGLSVEAVSD SQELRSVECN HLSNSGQDDL DRTESPEAAS
601: NSSVITSVGS SEDIVSVSVA GCVENSRGVE MMNNGRFEDT TYGNDSVTLV KNIVASGNEV FQHELQQQLQ PNAMLGMVLD SAEKVLSEAV QEPVIRRLSL
701: PSTV
101: VHGPGADLDT LCIGPSYVNR EEDFFYTLHD ILANIEEVTE LQPIPDAHVP VMKFKFDGIS IDLLYASISR LIVPEDLDIS DVSVLHNVDE PTVRSLNGCR
201: VADQILKLVP NVEHFRTTLR CLKFWAKRRG IYSNVTGFLG GVNLALLVAR VCQFYPKAVP SMLVSRFFRV YTQWRWPTPV MLCPIEENDL GFPVWHPGKN
301: PRDRSHHMPI ITPAYPCMNS SYNVSMSTLR VMMEQFQYGN KICGEIELSK DCWKALFEKY SFFESYKNYL QVDVVAADAD DLRSWKGWVE SRLRQLTLMI
401: ERDTFGKLQC HPYHHEFVDT SRQCAHCAFF MGLHRKEGEV VQEGQQFDIR GTVEEFRHSV NMYMFWKPGM EIYVSHVRRR QIPCYVFPDG YKRSRPSRPT
501: SQFENCKSFH NNEVSVTEHV ERIRKRKNND GVDVREDAIV KRQYACPPGD RLARRNSLGT GGLSVEAVSD SQELRSVECN HLSNSGQDDL DRTESPEAAS
601: NSSVITSVGS SEDIVSVSVA GCVENSRGVE MMNNGRFEDT TYGNDSVTLV KNIVASGNEV FQHELQQQLQ PNAMLGMVLD SAEKVLSEAV QEPVIRRLSL
701: PSTV
001: MVSTQQRTDD DSSQPVKASL KSYGITEPLS IAGPSAADVK RNLELEKFLV DEGLYESKEE TMRREEVVVR IDQIVKHWVK QLTRQRGYTD QMVEDANAVI
101: FTFGSYRLGV HGPMADIDTL CVGPSYVNRE EDFFIFFRDI LAEMEEVTEL QPVTDAHVPV MKFKFQGISI DLLYASISLL VIPQDLDISN SSVLCDVDEQ
201: TVRSLNGCRV ADQILKLVPN SEHFRTTLRC LKYWAKKRGV YSNVTGFLGG VNWALLVARL CQFYPNAIPS MLVSRFFRVY TQWRWPNPVM LCAIEEDDLS
301: FPVWDPRKNH RDRYHLMPII TPAYPCMNSS YNVSQSTLRV MTEQFQFGNT ICQEIELNKQ HWSSLFQQYM FFEAYKNYLQ VDVLAADAED LLAWKGWVES
401: RFRQLTLKIE RDTNGMLMCH PQPNEYVDTS KQFRHCAFFM GLQRADGFGG QECQQFDIRG TVDEFRQEVN MYMFWRPGMD VHVSHVRRRQ LPSFVFPNGY
501: KRSRQSRHQS QQCREPGDEG VGSLSDSVER YAKRKNDDEI MNSRPEKREK RASCSLHTLD AASPDSSGIT TSGTPQIGIV PGPRAECLVT GDLVCNVTSL
601: PNVEVEAEKF ISKITELRKF SQYEHTSGSE QILEVDSRAL VQSYHDLAEP VAKHVRPDLS ALLACEGGQN KEIGHDMGSE SINDTDTQHL PRRLNVNEDV
701: DEVEREAKLG EIAGGVLWNG HCGRNLDHEG FVTPANLDSA VENRNLHSDG LFKSGLPEEL QSNSLLSGTG KLDDGASSRR LSLKSVA
101: FTFGSYRLGV HGPMADIDTL CVGPSYVNRE EDFFIFFRDI LAEMEEVTEL QPVTDAHVPV MKFKFQGISI DLLYASISLL VIPQDLDISN SSVLCDVDEQ
201: TVRSLNGCRV ADQILKLVPN SEHFRTTLRC LKYWAKKRGV YSNVTGFLGG VNWALLVARL CQFYPNAIPS MLVSRFFRVY TQWRWPNPVM LCAIEEDDLS
301: FPVWDPRKNH RDRYHLMPII TPAYPCMNSS YNVSQSTLRV MTEQFQFGNT ICQEIELNKQ HWSSLFQQYM FFEAYKNYLQ VDVLAADAED LLAWKGWVES
401: RFRQLTLKIE RDTNGMLMCH PQPNEYVDTS KQFRHCAFFM GLQRADGFGG QECQQFDIRG TVDEFRQEVN MYMFWRPGMD VHVSHVRRRQ LPSFVFPNGY
501: KRSRQSRHQS QQCREPGDEG VGSLSDSVER YAKRKNDDEI MNSRPEKREK RASCSLHTLD AASPDSSGIT TSGTPQIGIV PGPRAECLVT GDLVCNVTSL
601: PNVEVEAEKF ISKITELRKF SQYEHTSGSE QILEVDSRAL VQSYHDLAEP VAKHVRPDLS ALLACEGGQN KEIGHDMGSE SINDTDTQHL PRRLNVNEDV
701: DEVEREAKLG EIAGGVLWNG HCGRNLDHEG FVTPANLDSA VENRNLHSDG LFKSGLPEEL QSNSLLSGTG KLDDGASSRR LSLKSVA
Arabidopsis Description
PAPS2PAPS2 [Source:UniProtKB/TrEMBL;Acc:A0A178VXR1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.