CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74871	Soybean	endoplasmic reticulum	33.33	34.07
KRG89631	Soybean	endoplasmic reticulum, extracellular	32.47	33.04
KRH70737	Soybean	extracellular	32.03	32.74
KRH70736	Soybean	extracellular	32.03	32.6
KRG89632	Soybean	extracellular	31.17	30.25
KRH74869	Soybean	endoplasmic reticulum, extracellular, plasma membrane	30.3	29.41
PGSC0003DMT400068755	Potato	extracellular	26.84	28.7
Solyc01g055200.1.1	Tomato	extracellular	25.54	26.7
KRH06524	Soybean	extracellular	29.87	25.65
KRH47963	Soybean	nucleus	29.44	25.19
KRH70036	Soybean	extracellular	23.81	23.81
KRH70039	Soybean	extracellular	23.81	23.81
KRH70040	Soybean	extracellular	23.38	23.38
KRH70037	Soybean	extracellular	22.51	22.22

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	UniProt:A0A0R0KLN7	EMBL:ACUP02002087	EnsemblPlantsGene:GLYMA_03G194500	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0005575
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	InterPro:IPR036430	EnsemblPlants:KRH67902	ProteinID:KRH67902
ProteinID:KRH67902.1	PFAM:PF00445	ScanProsite:PS00530	ScanProsite:PS00531	PANTHER:PTHR11240	InterPro:RNase_T2-like
InterPro:RNase_T2-like_sf	InterPro:RNase_T2_His_AS_1	InterPro:RNase_T2_His_AS_2	SUPFAM:SSF55895	SignalP:SignalP-TM	TMHMM:TMhelix
UniParc:UPI0006ED5FC2	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:40508494..40511779

Molecular Weight (calculated)

26677.1 Da

IEP (calculated)

8.460

GRAVY (calculated)

-0.275

Length

231 amino acids

Sequence
(BLAST)

001: MSQLRMYPLM ICVFSLVLVL NVPISFASYD FFMLSETWPA TYCGIKNRLL PCAKQPNTFT IHGLWPQNHI GPQPASCSNL QKDKFDKRII TSSLKSALET
101: GWPNLNTQND MRFWVTEWDK HGTCSLNKFS QFNYFRLALK IKGEYNLMTI LSGEQIVPHH STAYDKNSII QAIHGVIDTY PQLTCYKYNL NKQSYYNLSE
201: IRLCLDDNGK NYINCPTPTT NCNGNMLYWP I

Best Arabidopsis Sequence Match ( AT1G26820.1 )
(BLAST)

001: MKFFIFILAL QQLYVQSFAQ DFDFFYFVLQ WPGAYCDSRH SCCYPQTGKP AADFGIHGLW PNYKTGGWPQ NCNPDSRFDD LRVSDLMSDL QREWPTLSCP
101: SNDGMKFWTH EWEKHGTCAE SELDQHDYFE AGLKLKQKAN LLHALTNAGI KPDDKFYEMK DIENTIKQVV GFAPGIECNK DSSHNSQLYQ IYLCVDTSAS
201: KFINCPVMPH GRCDSRVQFP KF

Arabidopsis Description

RNS3Ribonuclease 3 [Source:UniProtKB/Swiss-Prot;Acc:P42815]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.