CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70036	Soybean	extracellular	97.84	97.84
KRH70039	Soybean	extracellular	97.4	97.4
KRH70037	Soybean	extracellular	76.19	75.21
PGSC0003DMT400068755	Potato	extracellular	25.97	27.78
KRH70736	Soybean	extracellular	26.84	27.31
KRH70737	Soybean	extracellular	26.41	26.99
KRH74871	Soybean	endoplasmic reticulum	25.97	26.55
KRG89631	Soybean	endoplasmic reticulum, extracellular	25.97	26.43
KRH74869	Soybean	endoplasmic reticulum, extracellular, plasma membrane	25.97	25.21
KRG89632	Soybean	extracellular	24.68	23.95
KRH67902	Soybean	extracellular	23.38	23.38
Solyc01g055200.1.1	Tomato	extracellular	22.08	23.08
KRH47963	Soybean	nucleus	24.68	21.11
KRH06524	Soybean	extracellular	24.24	20.82

Protein Annotations

Gene3D:3.90.730.10	MapMan:35.1	EMBL:ACUP02000745	EnsemblPlantsGene:GLYMA_02G064400	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0033897	GO:GO:0090502	UniProt:I1JCX6
InterPro:IPR036430	EnsemblPlants:KRH70040	ProteinID:KRH70040	ProteinID:KRH70040.1	PFAM:PF00445	PANTHER:PTHR11240
PANTHER:PTHR11240:SF36	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	SUPFAM:SSF55895	SignalP:SignalP-noTM	UniParc:UPI00023BE30A

Description

hypothetical protein

Coordinates

chr2:+:5766138..5767678

Molecular Weight (calculated)

26621.7 Da

IEP (calculated)

7.213

GRAVY (calculated)

-0.466

Length

231 amino acids

Sequence
(BLAST)

001: MKSKFLFVFL FLGILNCEAQ YFNANPYDYL QLALRWPNSY CLTHEGGCRE IVPQYFTISY LHPMRRGGPD LRNCPSPFNM PNSTMETNKN DLLKYWPDLR
101: TDNFIESKSL WRDQWRMFGS CYSMMPDDYI VYALNSRKRN DLKKILTNAG IVASGNPYPT RRILQAFRKA LGVNVDIVCE PDRSGNVYLA EVHQCVDAAG
201: TTSIDCDNKA RGCDDDPIFP YMGFQPDKDP N

Best Arabidopsis Sequence Match ( AT2G02990.1 )
(BLAST)

001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF

Arabidopsis Description

RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.