CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70039	Soybean	extracellular	76.92	77.92
KRH70036	Soybean	extracellular	76.5	77.49
KRH70040	Soybean	extracellular	75.21	76.19
PGSC0003DMT400068755	Potato	extracellular	26.07	28.24
KRH70736	Soybean	extracellular	26.5	27.31
KRG89631	Soybean	endoplasmic reticulum, extracellular	26.07	26.87
KRH70737	Soybean	extracellular	24.79	25.66
KRH74871	Soybean	endoplasmic reticulum	24.36	25.22
KRH74869	Soybean	endoplasmic reticulum, extracellular, plasma membrane	25.64	25.21
KRH67902	Soybean	extracellular	22.22	22.51
KRG89632	Soybean	extracellular	22.65	22.27
Solyc01g055200.1.1	Tomato	extracellular	20.94	22.17
KRH47963	Soybean	nucleus	23.93	20.74
KRH06524	Soybean	extracellular	23.5	20.45

Protein Annotations

EntrezGene:100817818	Gene3D:3.90.730.10	MapMan:35.2	UniProt:A0A0R0L0S6	EMBL:ACUP02000745	EnsemblPlantsGene:GLYMA_02G064200
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0005488
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0033897
GO:GO:0090502	InterPro:IPR036430	EnsemblPlants:KRH70037	ProteinID:KRH70037	ProteinID:KRH70037.1	PFAM:PF00445
PANTHER:PTHR11240	PANTHER:PTHR11240:SF36	InterPro:RNase_T2-like	InterPro:RNase_T2-like_sf	SUPFAM:SSF55895	SignalP:SignalP-noTM
UniParc:UPI0006ED5B1F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:5745915..5749251

Molecular Weight (calculated)

27171.7 Da

IEP (calculated)

5.838

GRAVY (calculated)

-0.280

Length

234 amino acids

Sequence
(BLAST)

001: MIMNSILLVL LLMEILNCEA QYFDASPYDY LELALRWPNS YCLTHEDGCR EIVPQYFTIS YFRPRKLGGP DLQYCPTPIT LSNNIIETNK YDLLRFWPDL
101: RTDNFIESKS LWRDQWKKFG SCCFMMPDDY FVYALNNRKR YDLKRILTSA GKCIVANGNS YPTYRILQIF KKTLGLNVSI VCESDRSGNV YLAEVHQCVD
201: ISGTMPISCD NKAKGCDDDP IFPYMGFQPD KDPK

Best Arabidopsis Sequence Match ( AT2G02990.1 )
(BLAST)

001: MKILLASLCL ISLLVILPSV FSASSSSEDF DFFYFVQQWP GSYCDTQKKC CYPNSGKPAA DFGIHGLWPN YKDGTYPSNC DASKPFDSST ISDLLTSMKK
101: SWPTLACPSG SGEAFWEHEW EKHGTCSESV IDQHEYFQTA LNLKQKTNLL GALTKAGINP DGKSYSLESI RDSIKESIGF TPWVECNRDG SGNSQLYQVY
201: LCVDRSGSGL IECPVFPHGK CGAEIEFPSF

Arabidopsis Description

RNS1Ribonuclease 1 [Source:UniProtKB/Swiss-Prot;Acc:P42813]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.