Factsheet for Os02t0666800-01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
golgi 3
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051405_P001	Maize	golgi	79.89	79.89
EES05756	Sorghum	golgi	78.16	78.16
TraesCS6D01G226800.1	Wheat	extracellular, golgi, plasma membrane	75.29	74.43
TraesCS6A01G244600.1	Wheat	extracellular, golgi, plasma membrane	75.29	74.43
TraesCS6B01G279700.1	Wheat	extracellular, golgi, plasma membrane	74.71	73.86
HORVU6Hr1G064230.1	Barley	cytosol, golgi, mitochondrion, plasma membrane	73.56	72.73
GSMUA_Achr4P29330_001	Banana	cytosol, golgi, nucleus	63.79	64.16
VIT_04s0069g01100.t01	Wine grape	golgi	62.64	63.01
KRH72369	Soybean	mitochondrion	62.07	62.43
KRH02974	Soybean	cytosol, golgi, mitochondrion, plasma membrane	61.49	61.85
AT2G23940.1	Thale cress	cytosol, golgi, plasma membrane	60.92	61.27
CDX72247	Canola	cytosol, golgi, plasma membrane	60.92	61.27
CDY39209	Canola	cytosol, golgi, nucleus	60.34	60.69
Bra024071.1-P	Field mustard	cytosol, golgi, nucleus	59.77	60.12
Solyc07g006150.2.1	Tomato	nucleus	59.2	59.54
CDX68663	Canola	golgi, nucleus, plasma membrane	59.2	59.54
PGSC0003DMT400029172	Potato	cytosol, golgi, plasma membrane	57.47	57.8
AT4G30500.1	Thale cress	cytosol, golgi, mitochondrion, plasma membrane	54.02	54.34
Bra011198.1-P	Field mustard	cytosol, golgi, plasma membrane	60.34	47.73
CDY28192	Canola	cytosol, golgi, plasma membrane	59.2	46.82
GSMUA_Achr2P11620_001	Banana	mitochondrion, nucleus	11.49	35.09

Protein Annotations

MapMan:35.2	EntrezGene:4330253	EMBL:AK101444	ProteinID:BAD27782.1	ProteinID:BAF09591.1	ProteinID:BAS80193.1
ProteinID:EEE57535.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0006624	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0019538	EnsemblPlantsGene:Os02g0666800	EnsemblPlants:Os02t0666800-01	PFAM:PF05620	PANTHER:PTHR13505	UniProt:Q6EU87
InterPro:SND2/TMEM208	TMHMM:TMhelix	UniParc:UPI00003CE4E9	RefSeq:XP_015622624.1	SEG:seg	:

Description

Protein of unknown function DUF788 family protein. (Os02t0666800-01)

Coordinates

chr2:-:27079298..27082610

Molecular Weight (calculated)

19927.3 Da

IEP (calculated)

10.114

GRAVY (calculated)

-0.256

Length

174 amino acids

Sequence
(BLAST)

001: MAKQGVKKTR DANKKRMDLI LRLILAANVI YIVVRMAVMH SSFTWKHWIG LAVTSAAYFL PYKQLANMSE PEYSENGELI NAGYDLNAGG MSEYLQDVIY
101: ITLFVQLMSI FSDKFWWTYL VIPAYGGYKI SGLLRGAFFG GSSEGEEEDE KTRKKREKME KKASRGKIIK TRTR

Best Arabidopsis Sequence Match ( AT2G23940.2 )
(BLAST)

001: MANQGAKKRK EENAKHMAKL RRIIIASNAV YFVVRMLIFY SSFTWKHWIG LVITSLAYAF PYKQLDQMAK PSVTDDGELI DGGFDMTTGG ICGYLHDVIY
101: ITCFVQLASI ITGKFWYTYL VIPAFGVYKA SGLIRGFMSQ GSEGGVEDEK SRKKREKMER KASRGQVVKT RTR

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O82222]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.