Factsheet for Os04t0510500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G363800.1	Wheat	nucleus	65.15	67.04
TraesCS2B01G384400.1	Wheat	cytosol	64.94	66.96
TraesCS2A01G366900.1	Wheat	nucleus	64.72	66.59
EES11106	Sorghum	cytosol	59.31	61.85
HORVU2Hr1G088550.9	Barley	cytosol, nucleus	58.87	56.43
Zm00001d003033_P005	Maize	cytosol	54.98	53.14
Os02t0131700-00	Rice	plastid	34.42	35.49
Os04t0372800-01	Rice	nucleus, plasma membrane	25.11	23.87
Os02t0497700-01	Rice	cytosol, nucleus, plasma membrane	24.24	23.33
Os03t0418800-01	Rice	mitochondrion	21.43	18.93
Os07t0603100-01	Rice	extracellular	22.08	17.93
Os02t0131800-01	Rice	cytosol, peroxisome, plasma membrane	2.6	2.2

Protein Annotations

MapMan:16.9.1	Gene3D:3.10.450.50	Gene3D:3.30.70.330	EntrezGene:4336371	UniProt:A0A0P0WCA8	ProteinID:BAS90035.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003729	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	InterPro:IPR000504	InterPro:IPR012677
InterPro:IPR018222	InterPro:NTF2	InterPro:NTF2-like_dom_sf	InterPro:Nuclear_transport_factor_2_euk	InterPro:Nucleotide-bd_a/b_plait_sf	EnsemblPlantsGene:Os04g0510500
EnsemblPlants:Os04t0510500-01	PFAM:PF00076	PFAM:PF02136	PFscan:PS50102	PFscan:PS50177	PANTHER:PTHR10693
PANTHER:PTHR10693:SF22	InterPro:RBD_domain_sf	InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54427	SUPFAM:SSF54928
UniParc:UPI0001C7E29B	RefSeq:XP_015635676.1	SEG:seg	:	:	:

Description

Similar to OSIGBa0157K09-H0214G12.10 protein. (Os04t0510500-01)

Coordinates

chr4:+:25543329..25548790

Molecular Weight (calculated)

51788.6 Da

IEP (calculated)

4.776

GRAVY (calculated)

-0.592

Length

462 amino acids

Sequence
(BLAST)

001: MRGMGGRYHM EMPTGMRELD RVQQQIASHP YAFEVCSYFL QGYYNVLANS PELACQFYTD YSTAVRLDCQ TMKSSFGETV EEINDMIISM NVHKIEVKTA
101: NFVQSWGGAL QMLVTGLVQL KDYPVRKRFA QTMLLAPQDN GYYVFSDIFK LICDEYDYYE GADYSHTDNI LQMDAHNTMT ETASDCMPEE LEAKEALAPA
201: DIEERGPAFM PENHEVQQQD PLEYGVVIDD DSPSEELTPS FPSSTDSKQD APLGPIVHPS VTTPEEEPMG EPAKQTYASV LRTKGHPSHQ AIHSIPLNKA
301: TASSVESQLN GHMTKQVQPV HEKANLDTRY DASGPEDEEE FLSVYIGNLS PSTSVFDLEK VFQAFGRIKP DGVAIRSRKE AGIFFGFVEY EDMSGIHNAL
401: RASPIELNGR LIHVEERRQI YRGGGARRGR GRPADFSRGQ SGGRYDGDYA TRSKGNGYQR RV

Best Arabidopsis Sequence Match ( AT5G43960.1 )
(BLAST)

001: MATPYPGATQ VGSYFVGQYY QVLQQQPDLI HQFYSEPSRA IRIDGDSTET ANSLLHIHNM VMSLNFTAIE VKTINSVESW EGGVLVVVSG SVKTKEFSNR
101: RSFVQTFFLA PQEKGYFVLS DVFLFVDEGT VYYHQPSYLS EIKHEAQLNP PTRHPDPQVS DYVLEEEASD YVNAVQIKDD LVDKYSLQED QHQPQHEDYE
201: DEVAIEETPR EEVAVDVVHE HRAAPVEEPV GEKSKMSYAS ILKVAKEAAT VPVAATQPSY NKSSQDINEW DQPMRTPSPQ LAAPLAPIQQ SNSSTYVSDY
301: GAEAEDGSGF EDFEFKSVYV RNLPSDISAS EIEEEFKNFG TIKPDGVFLR TRKDVMGVCY AFVEFEDMTS VENAIKASPI YLGGRQVYIE ERRPNPAGVR
401: GARRGGGRGR GGYPTEAPRG RFGGRGSGRG NQDGGDYRPR GNGYYRGGGR

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9FND0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.