Factsheet for Os04t0690100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G125620.2	Barley	nucleus	15.06	74.26
TraesCS2A01G569700.1	Wheat	nucleus	36.35	69.08
Zm00001d026684_P001	Maize	nucleus	51.41	61.1
EES11701	Sorghum	nucleus	56.63	56.97
TraesCS2B01G627700.1	Wheat	nucleus	55.62	56.07
TraesCS2D01G580400.1	Wheat	nucleus	55.62	55.29
Os11t0169400-01	Rice	nucleus	37.15	43.53
Os10t0554001-01	Rice	cytosol	14.46	39.56
Os04t0115500-00	Rice	nucleus	35.74	37.08
Os01t0785900-01	Rice	mitochondrion, nucleus, peroxisome, plastid	29.52	30.31
Os06t0683000-01	Rice	cytosol, nucleus, plastid	25.7	27.53
Os02t0661600-00	Rice	mitochondrion	16.47	26.8
Os03t0264600-00	Rice	endoplasmic reticulum, nucleus	23.29	24.89

Protein Annotations

EnsemblPlants:Os04t0690100-01	EnsemblPlantsGene:Os04g0690100	Gene3D:3.90.228.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR013087	InterPro:Znf_C2H2_type	ncoils:Coil	PANTHER:PTHR31681	PANTHER:PTHR31681:SF21	PFscan:PS50157
ProteinID:BAF16263.2	ProteinID:BAS91768.1	ScanProsite:PS00028	SEG:seg	SUPFAM:SSF56399	UniParc:UPI0001B66A3E
UniProt:Q0J8S4	MapMan:15.5.15	:	:	:	:

Description

Zinc finger, C2H2-type domain containing protein. (Os04t0690100-01);Similar to H0814G11.16 protein. (Os04t0690100-02)

Coordinates

chr4:+:35297676..35300217

Molecular Weight (calculated)

54382.7 Da

IEP (calculated)

9.496

GRAVY (calculated)

-0.512

Length

498 amino acids

Sequence
(BLAST)

001: IRKQQAKKQH HSLHELAKRI AMVEPGRARE TKVTASASSS AGSDAAVMKK KKKKKKKLVV ASRKVDEKDK KQVDYKCSRS SGRDECCKVE SRHQQCTEPE
101: SPSYRLALRS LFSCRNSSSS SHAGHHHHRA ADGKKLGCNS ASICKVKQDN PMQQHMRRAE DELKVKDKPP VAEPYCKRRA SVSACNISSE RSVKKSVKQQ
201: QQEASSSLQS SASISASSCS STAGGGGSFR GMQQLSLRRL SGCYECHMVV DPISGVFRDS SSMRATICSC PDCGEIFVRP DSLHLHQSIR HAVSELGAED
301: TSRNIISIIF QSSWLKKQSP VCAIDRILKV HNAARTLARF DDYRAAVKAK AMAHRHPRCT ADGNELLRFH CATLSCDLGL HGATHLCDHL SCAACAIIRH
401: GFRPPAPGAG IRTMATSGRA HDAVVSSGSE GDRRAMLVCR VIAGRVRREE AAAAAAEEEE EEYDSVAGTT PGLYSNLDEL DVFNPTAILP CFVVVYRA

Best Arabidopsis Sequence Match ( AT1G75710.1 )
(BLAST)

001: MALLTFLPEN AEAPQKHKPT SSKRKKRDNP TDQTQTQKHK PQKPKKAVPP KQPSSWDQIK NLLTCKQIEG SRVHDPSKNS QSGPSMTTNL SPSKLGSSCS
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES

Arabidopsis Description

C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9LR10]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.