Factsheet for Zm00001d026684_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11701	Sorghum	nucleus	85.2	72.12
HORVU2Hr1G125620.2	Barley	nucleus	16.95	70.3
TraesCS2A01G569700.1	Wheat	nucleus	42.24	67.56
TraesCS2B01G627700.1	Wheat	nucleus	61.58	52.23
TraesCS2D01G580400.1	Wheat	nucleus	61.81	51.7
Os04t0690100-01	Rice	nucleus	61.1	51.41
Zm00001d053006_P001	Maize	nucleus	39.38	38.92
Zm00001d004822_P001	Maize	nucleus, plastid	29.59	35.53
Zm00001d004497_P001	Maize	nucleus, plastid	38.19	34.86
Zm00001d024883_P001	Maize	nucleus	39.86	32.62
Zm00001d012605_P001	Maize	nucleus	35.32	29.54
Zm00001d043243_P001	Maize	nucleus	35.08	29.11
Zm00001d047106_P001	Maize	plastid	20.53	29.05
Zm00001d029869_P001	Maize	mitochondrion	20.29	27.69
Zm00001d017504_P001	Maize	mitochondrion	18.85	26.96
Zm00001d028537_P001	Maize	endoplasmic reticulum, plasma membrane	28.16	25.54
Zm00001d014485_P001	Maize	nucleus, plastid	26.25	25.11

Protein Annotations

EnsemblPlants:Zm00001d026684_P001	EnsemblPlants:Zm00001d026684_T001	EnsemblPlantsGene:Zm00001d026684	Gene3D:3.90.228.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_type	PANTHER:PTHR31681	PANTHER:PTHR31681:SF22	PFscan:PS50157
ProteinID:AQK47449.1	ScanProsite:PS00028	SEG:seg	SUPFAM:SSF56399	UniParc:UPI0002217F82	UniProt:K7UNG9
MapMan:15.5.15	:	:	:	:	:

Description

C2H2-transcription factor 246C2H2-like zinc finger protein

Coordinates

chr10:+:149857632..149859149

Molecular Weight (calculated)

44396.6 Da

IEP (calculated)

8.530

GRAVY (calculated)

-0.319

Length

419 amino acids

Sequence
(BLAST)

001: MVERPGRSAG VREANKTSAA AMVKTTTTTN KEELESPSYR LAAFKSLFSC RNSHARPRAP DTGTGSRSKR LGCSAPSICK LKDDSVPVPP KETTGTASAG
101: EPCKRRASVS GSSDRCVKKP QCGAGSNKQL QRGGSSSSSG GSSFRAGMQL RRLSGCYECH MVVAGSASMR ATTICPCPDC GEVFVRQESL QLHQSIRHAV
201: SELGTDDTSR NIIEIIFQSS WLKKQSPVCK VDRILKVNNT PRTLARFEEY RDAVKARAGA EQLAVAAANS NRHPRCTADG NELLRFHCAT LACSLGLNGA
301: THLCDAAGTC AACGIIRDGF SSGGVLTMAT SGRAHDAAEA GAGLDEETTP RAMLVCRVIA GRVKRPKEAV PEEEAVADAA EESEYDSVAG SAGVYSNLEE
401: LLVFNPRAIL PCFVVVYKA

Best Arabidopsis Sequence Match ( AT1G75710.1 )
(BLAST)

001: MALLTFLPEN AEAPQKHKPT SSKRKKRDNP TDQTQTQKHK PQKPKKAVPP KQPSSWDQIK NLLTCKQIEG SRVHDPSKNS QSGPSMTTNL SPSKLGSSCS
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES

Arabidopsis Description

C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9LR10]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.