Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024883_P001 | Maize | nucleus | 81.05 | 72.66 |
| EES10376 | Sorghum | nucleus | 80.83 | 68.45 |
| TraesCS2A01G004600.1 | Wheat | nucleus | 50.33 | 68.34 |
| GSMUA_Achr11P... | Banana | nucleus | 36.38 | 64.23 |
| Os04t0115500-00 | Rice | nucleus | 66.88 | 63.96 |
| TraesCSU01G012300.1 | Wheat | nucleus, plastid | 65.58 | 62.06 |
| TraesCS2D01G004200.1 | Wheat | nucleus, plastid | 65.14 | 60.9 |
| GSMUA_Achr8P19240_001 | Banana | nucleus | 50.11 | 54.5 |
| GSMUA_Achr11P... | Banana | nucleus | 50.54 | 50.54 |
| PGSC0003DMT400025521 | Potato | plastid | 33.99 | 49.68 |
| CDX73189 | Canola | nucleus | 43.57 | 46.62 |
| CDY47503 | Canola | nucleus | 44.01 | 46.33 |
| VIT_18s0001g14130.t01 | Wine grape | vacuole | 41.83 | 45.82 |
| KRH17425 | Soybean | nucleus | 41.18 | 45.65 |
| KRH05942 | Soybean | nucleus | 40.96 | 45.08 |
| Bra015824.1-P | Field mustard | nucleus | 44.44 | 44.06 |
| AT1G75710.1 | Thale cress | nucleus | 44.23 | 43.94 |
| Bra014094.1-P | Field mustard | plastid | 39.87 | 43.78 |
| CDY13543 | Canola | nucleus | 41.18 | 43.75 |
| CDY20903 | Canola | nucleus, plastid | 39.65 | 43.44 |
| Bra015598.1-P | Field mustard | plastid | 39.22 | 42.96 |
| CDY39052 | Canola | nucleus | 41.61 | 42.83 |
| CDY06723 | Canola | nucleus, plastid | 39.0 | 42.72 |
| Bra008218.1-P | Field mustard | nucleus | 41.39 | 42.6 |
| Solyc04g081370.2.1 | Tomato | extracellular, vacuole | 41.83 | 42.57 |
| CDY16999 | Canola | nucleus, plastid | 35.51 | 39.37 |
| CDY17799 | Canola | nucleus, plastid | 37.04 | 39.17 |
| Zm00001d026684_P001 | Maize | nucleus | 34.86 | 38.19 |
| Zm00001d053006_P001 | Maize | nucleus | 30.07 | 32.55 |
| Zm00001d017504_P001 | Maize | mitochondrion | 18.52 | 29.01 |
| Zm00001d004822_P001 | Maize | nucleus, plastid | 21.79 | 28.65 |
| Zm00001d047106_P001 | Maize | plastid | 18.3 | 28.38 |
| PGSC0003DMT400076665 | Potato | cytosol | 9.59 | 27.67 |
| Zm00001d029869_P001 | Maize | mitochondrion | 18.08 | 27.04 |
| Zm00001d012605_P001 | Maize | nucleus | 29.19 | 26.75 |
| Zm00001d043243_P001 | Maize | nucleus | 29.41 | 26.73 |
| Zm00001d028537_P001 | Maize | endoplasmic reticulum, plasma membrane | 23.75 | 23.59 |
| Zm00001d014485_P001 | Maize | nucleus, plastid | 21.79 | 22.83 |
Protein Annotations
| EMBL:BT088265 | EnsemblPlants:Zm00001d004497_P001 | EnsemblPlants:Zm00001d004497_T001 | EnsemblPlantsGene:Zm00001d004497 | EntrezGene:100502466 | Gene3D:3.90.228.10 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR31681 |
| PANTHER:PTHR31681:SF20 | PFscan:PS50157 | ProteinID:ONM19027.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF56399 |
| UniParc:UPI0001A4BD3E | UniProt:C4JBR8 | MapMan:15.5.15 | : | : | : |
Description
C2H2-like zinc finger protein
Coordinates
chr2:-:115226193..115228070
Molecular Weight (calculated)
48707.7 Da
IEP (calculated)
10.001
GRAVY (calculated)
-0.405
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLATLLLPS VSTPTAGDHR THSRRHDHHH GSKRKKKPPP PPSPQPSLPL APRTPPPPGA PSPKVRAAGK NNHAQYQYQQ RRGQPTKNRA AAASSSWEQV
101: KSLLSCRTAT AAARVHDPSA LARLRGASLC AMRDVVLSSA SGDRDTAPLN RRRAPSSSAA SGAGSSSHHS SLRGLSGCYE CRAIDVEPMS RRRYPRPREL
201: CACPQCGEVF TMADSLEHHQ AIRHAVSELG PEDSGRNIVD IIFNSSWQKR GRPICHIDRI LKVHNAPRTV ARFEAYRDAV RSRSRCRAAA RVAADGNELL
301: RFHSAPLACA LGLGGATALC CAGGASSPCG VCTAIRHGFA PWAGAHPLGV RTTASSARAH DCGCSASPSS VQQTQQPAND AAACRAMLVC RVIAGRVRRG
401: GGGGATSNAA DEDQEGPFDS VAVEDAVSSS MYGNLEELFV ANPRAILPCF VVIYRVLDA
101: KSLLSCRTAT AAARVHDPSA LARLRGASLC AMRDVVLSSA SGDRDTAPLN RRRAPSSSAA SGAGSSSHHS SLRGLSGCYE CRAIDVEPMS RRRYPRPREL
201: CACPQCGEVF TMADSLEHHQ AIRHAVSELG PEDSGRNIVD IIFNSSWQKR GRPICHIDRI LKVHNAPRTV ARFEAYRDAV RSRSRCRAAA RVAADGNELL
301: RFHSAPLACA LGLGGATALC CAGGASSPCG VCTAIRHGFA PWAGAHPLGV RTTASSARAH DCGCSASPSS VQQTQQPAND AAACRAMLVC RVIAGRVRRG
401: GGGGATSNAA DEDQEGPFDS VAVEDAVSSS MYGNLEELFV ANPRAILPCF VVIYRVLDA
001: MALLTFLPEN AEAPQKHKPT SSKRKKRDNP TDQTQTQKHK PQKPKKAVPP KQPSSWDQIK NLLTCKQIEG SRVHDPSKNS QSGPSMTTNL SPSKLGSSCS
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES
Arabidopsis Description
C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9LR10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.