Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92505 | Sorghum | extracellular, plasma membrane | 86.8 | 88.13 |
| TraesCS4A01G089900.1 | Wheat | endoplasmic reticulum, golgi | 67.97 | 72.69 |
| HORVU4Hr1G061070.1 | Barley | golgi | 68.83 | 72.27 |
| TraesCS4D01G215000.1 | Wheat | golgi | 67.1 | 71.76 |
| TraesCS4B01G214400.1 | Wheat | golgi | 66.88 | 71.36 |
| Os03t0264600-00 | Rice | endoplasmic reticulum, nucleus | 69.7 | 69.1 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 40.48 | 50.4 |
| VIT_06s0004g06240.t01 | Wine grape | plastid | 32.68 | 45.35 |
| Bra039993.1-P | Field mustard | extracellular, golgi, plastid | 34.2 | 42.47 |
| CDX97869 | Canola | golgi | 33.55 | 42.12 |
| CDY51355 | Canola | golgi | 33.77 | 42.05 |
| Bra018369.1-P | Field mustard | extracellular, golgi, plastid | 34.2 | 41.91 |
| CDY02000 | Canola | golgi | 33.77 | 41.49 |
| AT2G29660.1 | Thale cress | golgi, plasma membrane | 33.33 | 41.29 |
| KRG98330 | Soybean | endoplasmic reticulum, golgi | 33.55 | 40.58 |
| PGSC0003DMT400078031 | Potato | extracellular, vacuole | 32.47 | 40.32 |
| Solyc06g076820.1.1 | Tomato | extracellular, vacuole | 32.47 | 39.47 |
| CDY45464 | Canola | golgi | 33.98 | 33.84 |
| Zm00001d047106_P001 | Maize | plastid | 19.48 | 30.41 |
| Zm00001d029869_P001 | Maize | mitochondrion | 19.26 | 28.99 |
| Zm00001d017504_P001 | Maize | mitochondrion | 18.18 | 28.67 |
| Zm00001d026684_P001 | Maize | nucleus | 25.54 | 28.16 |
| Zm00001d053006_P001 | Maize | nucleus | 23.38 | 25.47 |
| Zm00001d004497_P001 | Maize | nucleus, plastid | 23.59 | 23.75 |
| Zm00001d024883_P001 | Maize | nucleus | 25.11 | 22.66 |
| Zm00001d012605_P001 | Maize | nucleus | 24.24 | 22.36 |
| Zm00001d014485_P001 | Maize | nucleus, plastid | 21.0 | 22.15 |
| Zm00001d043243_P001 | Maize | nucleus | 24.03 | 21.98 |
| Zm00001d004822_P001 | Maize | nucleus, plastid | 15.58 | 20.63 |
Protein Annotations
| EntrezGene:100194357 | MapMan:15.5.15 | Gene3D:3.90.228.10 | UniProt:B6SPE6 | EMBL:BT066435 | EMBL:BT084542 |
| EMBL:EU954611 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | ProteinID:ONL96296.1 |
| ScanProsite:PS00028 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF4 | SUPFAM:SSF56399 | SignalP:SignalP-noTM | TMHMM:TMhelix |
| UniParc:UPI000182AE65 | EnsemblPlantsGene:Zm00001d028537 | EnsemblPlants:Zm00001d028537_P001 | EnsemblPlants:Zm00001d028537_T001 | InterPro:Znf_C2H2_type | SEG:seg |
Description
zinc finger protein-related
Coordinates
chr1:-:38582039..38583427
Molecular Weight (calculated)
48268.7 Da
IEP (calculated)
8.803
GRAVY (calculated)
0.012
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGSGGGGG GSLLLRGFLS LFFLLFLHIG HGGSCCFSPG AAARAQQEED EAAEADGKVV GGGGGSNKRR KISPLIFSPA ASSTAVTASD DSAGAPRRHV
101: SSLAASLRLY LHRIFRSGST GTKNGGTVVA GRDGEEEAVA TTVSSPIAQS LPHQPSSTSV VLSTPSSPCA WSSPLMMSPL SVRSLSATPF PSSPQQKLLQ
201: ASRQSFRSFA ARGDVFPCKV CGEVLGRPQL LELHQAMKHS LSELTHLDSS LNIIRMIFLA GWRPAASGAG AGAGAGEAPA VRRVLRIHHN PRALARFEEY
301: RDLVRARAAR RCGGEGAVVE ERCIADGNER LRFHCSTMLC SLGGGVCGSP YCCVCSTLRH GFAGKQADVD GIATYASAWT AHASLPADVE REFAFLQVRR
401: AMLVCRVVAG RVARGPADDK VAYDSMVPVR GGVGGGTGDD VELLVYNPRA VLPCFVILYS SS
101: SSLAASLRLY LHRIFRSGST GTKNGGTVVA GRDGEEEAVA TTVSSPIAQS LPHQPSSTSV VLSTPSSPCA WSSPLMMSPL SVRSLSATPF PSSPQQKLLQ
201: ASRQSFRSFA ARGDVFPCKV CGEVLGRPQL LELHQAMKHS LSELTHLDSS LNIIRMIFLA GWRPAASGAG AGAGAGEAPA VRRVLRIHHN PRALARFEEY
301: RDLVRARAAR RCGGEGAVVE ERCIADGNER LRFHCSTMLC SLGGGVCGSP YCCVCSTLRH GFAGKQADVD GIATYASAWT AHASLPADVE REFAFLQVRR
401: AMLVCRVVAG RVARGPADDK VAYDSMVPVR GGVGGGTGDD VELLVYNPRA VLPCFVILYS SS
001: MAARKLGSLL RQYFFSLCFL FLGCFFFPKD ADYKQKRRKK KLRRVSSSSG SSLSSSWTYL KRVFLSTTRI SKSRNQTHPN VTLTSARSSQ NSLVTLVQPD
101: TTNQPDPETR IHQQTEFEIS SSDEIFPCNS CGEIFPKINL LENHIAIKHA VSELIAGESS TNIVKIIFKS GWPEQGNYKS PVINRILKIH NSSKILTRFE
201: EYREFVKAKA ARSNGGGRRW DDERCVADGN ELLRFYCSTF MCDLGQNGKS NLCGHQYCSI CGIIGSGFSP KLDGIATLAT GWRGHVAVPE EVEEEFGFMN
301: VKRAMLVCRV VAGRVGCDLI DDDDVDKSDG GGYDSLVGQS GNKSGALLRI DDDELLVFNP RAVLPCFVIV YTV
101: TTNQPDPETR IHQQTEFEIS SSDEIFPCNS CGEIFPKINL LENHIAIKHA VSELIAGESS TNIVKIIFKS GWPEQGNYKS PVINRILKIH NSSKILTRFE
201: EYREFVKAKA ARSNGGGRRW DDERCVADGN ELLRFYCSTF MCDLGQNGKS NLCGHQYCSI CGIIGSGFSP KLDGIATLAT GWRGHVAVPE EVEEEFGFMN
301: VKRAMLVCRV VAGRVGCDLI DDDDVDKSDG GGYDSLVGQS GNKSGALLRI DDDELLVFNP RAVLPCFVIV YTV
Arabidopsis Description
At2g29660 [Source:UniProtKB/TrEMBL;Acc:O82389]
SUBAcon: [plasma membrane,golgi]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.