Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 6
- plastid 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039993.1-P | Field mustard | extracellular, golgi, plastid | 96.77 | 96.51 |
| CDX97869 | Canola | golgi | 91.64 | 92.39 |
| CDY02000 | Canola | golgi | 84.91 | 83.78 |
| AT2G29660.1 | Thale cress | golgi, plasma membrane | 81.94 | 81.5 |
| CDY45464 | Canola | golgi | 85.44 | 68.32 |
| VIT_06s0004g06240.t01 | Wine grape | plastid | 52.83 | 58.86 |
| PGSC0003DMT400078031 | Potato | extracellular, vacuole | 51.21 | 51.08 |
| KRG98330 | Soybean | endoplasmic reticulum, golgi | 52.29 | 50.79 |
| Solyc06g076820.1.1 | Tomato | extracellular, vacuole | 51.48 | 50.26 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 38.81 | 38.81 |
| TraesCS4A01G089900.1 | Wheat | endoplasmic reticulum, golgi | 41.78 | 35.88 |
| TraesCS4D01G215000.1 | Wheat | golgi | 41.51 | 35.65 |
| EER92505 | Sorghum | extracellular, plasma membrane | 43.67 | 35.6 |
| TraesCS4B01G214400.1 | Wheat | golgi | 41.24 | 35.33 |
| HORVU4Hr1G061070.1 | Barley | golgi | 41.78 | 35.23 |
| Zm00001d028537_P001 | Maize | endoplasmic reticulum, plasma membrane | 42.05 | 33.77 |
| Os03t0264600-00 | Rice | endoplasmic reticulum, nucleus | 42.32 | 33.69 |
| CDY19564 | Canola | nucleus | 22.64 | 31.82 |
| CDY12954 | Canola | nucleus | 22.64 | 31.82 |
| CDX76365 | Canola | cytosol | 21.29 | 30.62 |
| CDY42181 | Canola | cytosol | 21.29 | 30.62 |
| CDY06723 | Canola | nucleus, plastid | 32.08 | 28.4 |
| CDY20903 | Canola | nucleus, plastid | 31.81 | 28.16 |
| CDY63658 | Canola | cytosol | 21.02 | 28.06 |
| CDY16714 | Canola | cytosol | 21.02 | 28.06 |
| CDY13543 | Canola | nucleus | 31.54 | 27.08 |
| CDY47503 | Canola | nucleus | 31.81 | 27.06 |
| CDX73189 | Canola | nucleus | 31.0 | 26.81 |
| CDY29286 | Canola | nucleus | 29.65 | 26.76 |
| CDY39052 | Canola | nucleus | 31.81 | 26.46 |
| CDX89265 | Canola | nucleus | 29.65 | 25.76 |
| CDY16999 | Canola | nucleus, plastid | 28.3 | 25.36 |
| CDY06635 | Canola | nucleus | 29.92 | 25.23 |
| CDY28761 | Canola | nucleus | 30.19 | 25.06 |
| CDY17799 | Canola | nucleus, plastid | 28.84 | 24.65 |
| CDY49785 | Canola | cytosol | 23.72 | 24.58 |
| CDY18344 | Canola | nucleus | 29.92 | 24.5 |
| CDX97964 | Canola | cytosol | 23.45 | 24.23 |
Protein Annotations
| EnsemblPlants:CDY51355 | EnsemblPlantsGene:GSBRNA2T00003261001 | Gene3D:3.90.228.10 | GO:A0A078IJY0 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF24 | PFscan:PS50157 |
| PFscan:PS51257 | ProteinID:CDY51355 | ProteinID:CDY51355.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF56399 |
| UniParc:UPI0004EE304D | UniProt:A0A078IJY0 | MapMan:15.5.15 | : | : | : |
Description
BnaA04g28490DBnaA04g28490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJY0]
Coordinates
chrLK032988:-:16390..17641
Molecular Weight (calculated)
40676.5 Da
IEP (calculated)
7.987
GRAVY (calculated)
-0.220
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARKLGSLL RQHFFSLFFL FVGCFFFPKE GDCKQKKRKK NLRTVSSGSG SGLSSSWLSL KRFLLSTTRI SKPRSQTHLN GQLTSTLTSA RSSHNSLVTL
101: VQPDPEPRVE NGLSDDSEEI FSCTTCGEIF PKTNLLEHHF AVKHAVTELT DGESSTNIVK IIFKSGWPDL NNKAPSIHRI LKIHNSPKIL ARFEEYREFV
201: KAKAARTSSG GGGGGRRWDD ERCVADGNEL LRFYCSTFMC DLGQNGNSNL CGHQYCSVCG IIGSGFSPKL DGIATLATGW RGHAAVPEEV EEEFGFMNVK
301: RAMLVCRVVA GRVGCDLIGD DDVDKSDGGY DSLVGEGSGS RSGALLRIDD EELLVFNPRA VLPCFVIVYT V
101: VQPDPEPRVE NGLSDDSEEI FSCTTCGEIF PKTNLLEHHF AVKHAVTELT DGESSTNIVK IIFKSGWPDL NNKAPSIHRI LKIHNSPKIL ARFEEYREFV
201: KAKAARTSSG GGGGGRRWDD ERCVADGNEL LRFYCSTFMC DLGQNGNSNL CGHQYCSVCG IIGSGFSPKL DGIATLATGW RGHAAVPEEV EEEFGFMNVK
301: RAMLVCRVVA GRVGCDLIGD DDVDKSDGGY DSLVGEGSGS RSGALLRIDD EELLVFNPRA VLPCFVIVYT V
001: MAARKLGSLL RQYFFSLCFL FLGCFFFPKD ADYKQKRRKK KLRRVSSSSG SSLSSSWTYL KRVFLSTTRI SKSRNQTHPN VTLTSARSSQ NSLVTLVQPD
101: TTNQPDPETR IHQQTEFEIS SSDEIFPCNS CGEIFPKINL LENHIAIKHA VSELIAGESS TNIVKIIFKS GWPEQGNYKS PVINRILKIH NSSKILTRFE
201: EYREFVKAKA ARSNGGGRRW DDERCVADGN ELLRFYCSTF MCDLGQNGKS NLCGHQYCSI CGIIGSGFSP KLDGIATLAT GWRGHVAVPE EVEEEFGFMN
301: VKRAMLVCRV VAGRVGCDLI DDDDVDKSDG GGYDSLVGQS GNKSGALLRI DDDELLVFNP RAVLPCFVIV YTV
101: TTNQPDPETR IHQQTEFEIS SSDEIFPCNS CGEIFPKINL LENHIAIKHA VSELIAGESS TNIVKIIFKS GWPEQGNYKS PVINRILKIH NSSKILTRFE
201: EYREFVKAKA ARSNGGGRRW DDERCVADGN ELLRFYCSTF MCDLGQNGKS NLCGHQYCSI CGIIGSGFSP KLDGIATLAT GWRGHVAVPE EVEEEFGFMN
301: VKRAMLVCRV VAGRVGCDLI DDDDVDKSDG GGYDSLVGQS GNKSGALLRI DDDELLVFNP RAVLPCFVIV YTV
Arabidopsis Description
At2g29660 [Source:UniProtKB/TrEMBL;Acc:O82389]
SUBAcon: [plasma membrane,golgi]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.