Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76365 | Canola | cytosol | 96.12 | 96.12 |
| AT4G22560.1 | Thale cress | cytosol, plastid | 82.17 | 80.3 |
| CDY16714 | Canola | cytosol | 74.81 | 69.42 |
| CDY63658 | Canola | cytosol | 74.03 | 68.7 |
| Solyc08g079010.1.1 | Tomato | cytosol | 35.66 | 58.23 |
| CDY12954 | Canola | nucleus | 53.1 | 51.89 |
| CDY19564 | Canola | nucleus | 52.71 | 51.52 |
| VIT_02s0154g00220.t01 | Wine grape | cytosol | 56.98 | 51.4 |
| KRH28045 | Soybean | mitochondrion | 53.88 | 48.77 |
| PGSC0003DMT400012224 | Potato | nucleus | 55.81 | 48.16 |
| KRH77393 | Soybean | mitochondrion | 52.33 | 47.54 |
| KRH04088 | Soybean | cytosol | 53.1 | 47.08 |
| KRH57359 | Soybean | cytosol | 51.16 | 46.15 |
| Os10t0554001-01 | Rice | cytosol | 31.78 | 45.05 |
| GSMUA_Achr5P15290_001 | Banana | nucleus | 43.41 | 44.09 |
| GSMUA_Achr4P27010_001 | Banana | plastid | 48.06 | 43.36 |
| GSMUA_Achr2P10020_001 | Banana | cytosol | 44.19 | 42.54 |
| GSMUA_Achr1P01700_001 | Banana | nucleus | 48.06 | 42.03 |
| GSMUA_Achr7P07110_001 | Banana | cytosol | 44.96 | 42.03 |
| TraesCS5A01G536800.1 | Wheat | cytosol | 31.01 | 41.67 |
| GSMUA_Achr4P30380_001 | Banana | cytosol | 43.8 | 39.93 |
| TraesCS6A01G248100.1 | Wheat | plastid | 41.09 | 38.27 |
| GSMUA_Achr5P13520_001 | Banana | cytosol, mitochondrion, peroxisome | 43.41 | 37.97 |
| Zm00001d017504_P001 | Maize | mitochondrion | 43.02 | 37.88 |
| TraesCS6D01G230200.1 | Wheat | plastid | 41.09 | 37.86 |
| TraesCS6B01G276600.1 | Wheat | plastid | 41.09 | 37.86 |
| HORVU6Hr1G063400.2 | Barley | plastid | 40.7 | 37.37 |
| KRH37293 | Soybean | plastid | 21.32 | 35.71 |
| KXG31078 | Sorghum | plastid | 42.25 | 34.49 |
| Os02t0661600-00 | Rice | mitochondrion | 39.53 | 33.33 |
| Zm00001d047106_P001 | Maize | plastid | 37.6 | 32.77 |
| TraesCS1D01G214000.1 | Wheat | mitochondrion, plastid | 35.66 | 31.83 |
| HORVU1Hr1G053950.1 | Barley | mitochondrion, plastid | 36.05 | 31.63 |
| TraesCS1A01G210700.1 | Wheat | mitochondrion, plastid | 35.66 | 31.4 |
| TraesCS1B01G224700.1 | Wheat | mitochondrion, plastid | 35.27 | 31.06 |
| Zm00001d029869_P001 | Maize | mitochondrion | 36.82 | 30.94 |
| KXG38947 | Sorghum | mitochondrion | 37.21 | 30.0 |
| TraesCS4D01G361200.1 | Wheat | plastid | 35.27 | 29.55 |
| TraesCS4B01G369900.1 | Wheat | plastid | 34.88 | 28.75 |
| CDY29286 | Canola | nucleus | 36.05 | 22.63 |
| CDX89265 | Canola | nucleus | 36.05 | 21.78 |
| CDX73189 | Canola | nucleus | 36.05 | 21.68 |
| CDY16999 | Canola | nucleus, plastid | 34.5 | 21.5 |
| CDY20903 | Canola | nucleus, plastid | 34.88 | 21.48 |
| CDY06723 | Canola | nucleus, plastid | 34.88 | 21.48 |
| CDX97869 | Canola | golgi | 30.62 | 21.47 |
| CDX97964 | Canola | cytosol | 29.84 | 21.45 |
| CDY51355 | Canola | golgi | 30.62 | 21.29 |
| CDY06635 | Canola | nucleus | 36.05 | 21.14 |
| CDY47503 | Canola | nucleus | 35.66 | 21.1 |
| CDY13543 | Canola | nucleus | 35.27 | 21.06 |
| CDY49785 | Canola | cytosol | 28.68 | 20.67 |
| CDY28761 | Canola | nucleus | 35.66 | 20.58 |
| CDY17799 | Canola | nucleus, plastid | 34.5 | 20.51 |
| CDY02000 | Canola | golgi | 29.84 | 20.48 |
| CDY39052 | Canola | nucleus | 34.88 | 20.18 |
| CDY18344 | Canola | nucleus | 35.27 | 20.09 |
| CDY45464 | Canola | golgi | 29.84 | 16.59 |
Protein Annotations
| EnsemblPlants:CDY42181 | EnsemblPlantsGene:GSBRNA2T00074379001 | Gene3D:3.90.228.10 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF12 | ProteinID:CDY42181 |
| ProteinID:CDY42181.1 | SEG:seg | SUPFAM:SSF56399 | UniParc:UPI0004EB3F0B | UniProt:A0A078HWR0 | MapMan:15.5.15 |
Description
BnaC03g65020DBnaC03g65020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HWR0]
Coordinates
chrLK032517:+:93992..94848
Molecular Weight (calculated)
28686.8 Da
IEP (calculated)
8.482
GRAVY (calculated)
-0.528
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNGWIKFTS LHCKSKAFDD VYDFNSYSCR KSSHCSKDVI DTRIGTKNLK PDPKLRRLKS CRAEPELNPS TRTRRSKSAR TSDALTELPD EHPSRNVVEI
101: IFQSSWRSDE FPGRVEMIYK VENGSRTVTR FEEYREVVKS RAGINGDRED TCEEDVRCLA DGNEMMRFYP LPDGVNGGAW AFSGGKSQAV CTFSSSGEAH
201: ASGGGGGGRR AMLICRVIAG QVANRIGFGS DSVAGRDGEL YVFDTRAVLP CFLIIFRL
101: IFQSSWRSDE FPGRVEMIYK VENGSRTVTR FEEYREVVKS RAGINGDRED TCEEDVRCLA DGNEMMRFYP LPDGVNGGAW AFSGGKSQAV CTFSSSGEAH
201: ASGGGGGGRR AMLICRVIAG QVANRIGFGS DSVAGRDGEL YVFDTRAVLP CFLIIFRL
001: MPNGWIKSLQ CKSKAFDDVY NFNSKSLMSS SSYNCSRKSS HCVKDVIDTR LSKKNQKPDP NLRRFKSCRT ETELLNPPNR TRRSKSARTS DALTELPDGH
101: PSRNVVEIIF HSSWSSDEFP GRIEMIFKVE HGSRTVTRFE EYREVVKSRA GFNGGTCEEE DARCLADGNE MMRFYPVLDG FNGGACVFAG GKGQAVCTFS
201: GSGEAYVSSG GGGGRKAMMI CRVIAGRVDD VIGFGSDSVA GRDGELFVFD TRAVLPCFLI IFRL
101: PSRNVVEIIF HSSWSSDEFP GRIEMIFKVE HGSRTVTRFE EYREVVKSRA GFNGGTCEEE DARCLADGNE MMRFYPVLDG FNGGACVFAG GKGQAVCTFS
201: GSGEAYVSSG GGGGRKAMMI CRVIAGRVDD VIGFGSDSVA GRDGELFVFD TRAVLPCFLI IFRL
Arabidopsis Description
Sulfated surface-like glycoprotein [Source:UniProtKB/TrEMBL;Acc:Q9SUW3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.