Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 6
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018369.1-P | Field mustard | extracellular, golgi, plastid | 81.03 | 99.73 |
| CDY02000 | Canola | golgi | 80.39 | 99.2 |
| CDX97869 | Canola | golgi | 68.1 | 85.87 |
| CDY51355 | Canola | golgi | 68.32 | 85.44 |
| AT2G29660.1 | Thale cress | golgi, plasma membrane | 67.89 | 84.45 |
| VIT_06s0004g06240.t01 | Wine grape | plastid | 43.32 | 60.36 |
| KRG98330 | Soybean | endoplasmic reticulum, golgi | 43.97 | 53.4 |
| PGSC0003DMT400078031 | Potato | extracellular, vacuole | 42.03 | 52.42 |
| Solyc06g076820.1.1 | Tomato | extracellular, vacuole | 42.24 | 51.58 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 31.47 | 39.35 |
| TraesCS4A01G089900.1 | Wheat | endoplasmic reticulum, golgi | 34.48 | 37.04 |
| TraesCS4D01G215000.1 | Wheat | golgi | 34.27 | 36.81 |
| TraesCS4B01G214400.1 | Wheat | golgi | 34.05 | 36.49 |
| HORVU4Hr1G061070.1 | Barley | golgi | 34.27 | 36.14 |
| EER92505 | Sorghum | extracellular, plasma membrane | 35.13 | 35.82 |
| Os03t0264600-00 | Rice | endoplasmic reticulum, nucleus | 34.27 | 34.12 |
| Zm00001d028537_P001 | Maize | endoplasmic reticulum, plasma membrane | 33.84 | 33.98 |
| CDY12954 | Canola | nucleus | 18.32 | 32.2 |
| CDY19564 | Canola | nucleus | 18.1 | 31.82 |
| CDX76365 | Canola | cytosol | 16.81 | 30.23 |
| CDY42181 | Canola | cytosol | 16.59 | 29.84 |
| CDY06723 | Canola | nucleus, plastid | 25.86 | 28.64 |
| CDY20903 | Canola | nucleus, plastid | 25.65 | 28.4 |
| CDY63658 | Canola | cytosol | 16.81 | 28.06 |
| CDY16714 | Canola | cytosol | 16.81 | 28.06 |
| CDX73189 | Canola | nucleus | 25.86 | 27.97 |
| CDY47503 | Canola | nucleus | 26.08 | 27.75 |
| CDY13543 | Canola | nucleus | 25.65 | 27.55 |
| CDY39052 | Canola | nucleus | 25.86 | 26.91 |
| CDY16999 | Canola | nucleus, plastid | 23.92 | 26.81 |
| CDY17799 | Canola | nucleus, plastid | 24.35 | 26.04 |
| CDY29286 | Canola | nucleus | 23.06 | 26.03 |
| CDX89265 | Canola | nucleus | 23.06 | 25.06 |
| CDY06635 | Canola | nucleus | 23.49 | 24.77 |
| CDY28761 | Canola | nucleus | 23.49 | 24.38 |
| CDY49785 | Canola | cytosol | 18.53 | 24.02 |
| CDX97964 | Canola | cytosol | 18.32 | 23.68 |
| CDY18344 | Canola | nucleus | 23.06 | 23.62 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.90.228.10 | GO:A0A078I7S8 | UniProt:A0A078I7S8 | EnsemblPlants:CDY45464 | ProteinID:CDY45464 |
| ProteinID:CDY45464.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00082090001 | InterPro:IPR013087 | ScanProsite:PS00028 | PFscan:PS50157 | PFscan:PS51257 |
| PANTHER:PTHR31681 | PANTHER:PTHR31681:SF24 | SUPFAM:SSF56399 | TMHMM:TMhelix | UniParc:UPI0004EDF4C2 | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
BnaA05g12370DBnaA05g12370D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078I7S8]
Coordinates
chrLK032625:+:207620..209678
Molecular Weight (calculated)
51022.4 Da
IEP (calculated)
9.191
GRAVY (calculated)
-0.125
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARKLGSLL RQHFFSLFFL FVGCFFFPKG GDLRQKRRKK KKLRTVTSGS GLSSSWTYLK RVFLSTTRIS KSRNQTHPNG PLTTLTSARS SQNSLVTLVQ
101: PDPETRTENG FSDISSSDSP PFLPLRSEIF PCTTCGEIFP KTTLLEHHIA IKHAVSELVD GESSTNIVKI IFKSGWPEQG DNKKIPEIHR ILKIHNSPKI
201: LARFEEYREF VKAKAARGSG NGRWDDERCV VDGNELLRFY CSTFMCSLGQ NGSSGLCGHQ YCSICGIIGS GFSPKLDGIA TFATGWRGHV AVPEEVEEEF
301: GFMNVKRAML VCRVVAGRVG CDLIADDDVD KSGGGYDSLV GQGSGSKSGA LLRIDDEELL VFNPRAVLPC FVIVYTVFGS EVIVNRMKLQ RLLGSRKGGA
401: SKPSSSGPVT AFTQARLLGD LCIFFGKSET FCLKASKYDV SWSPQLILYI TLSTALEFTI SQPA
101: PDPETRTENG FSDISSSDSP PFLPLRSEIF PCTTCGEIFP KTTLLEHHIA IKHAVSELVD GESSTNIVKI IFKSGWPEQG DNKKIPEIHR ILKIHNSPKI
201: LARFEEYREF VKAKAARGSG NGRWDDERCV VDGNELLRFY CSTFMCSLGQ NGSSGLCGHQ YCSICGIIGS GFSPKLDGIA TFATGWRGHV AVPEEVEEEF
301: GFMNVKRAML VCRVVAGRVG CDLIADDDVD KSGGGYDSLV GQGSGSKSGA LLRIDDEELL VFNPRAVLPC FVIVYTVFGS EVIVNRMKLQ RLLGSRKGGA
401: SKPSSSGPVT AFTQARLLGD LCIFFGKSET FCLKASKYDV SWSPQLILYI TLSTALEFTI SQPA
001: MAARKLGSLL RQYFFSLCFL FLGCFFFPKD ADYKQKRRKK KLRRVSSSSG SSLSSSWTYL KRVFLSTTRI SKSRNQTHPN VTLTSARSSQ NSLVTLVQPD
101: TTNQPDPETR IHQQTEFEIS SSDEIFPCNS CGEIFPKINL LENHIAIKHA VSELIAGESS TNIVKIIFKS GWPEQGNYKS PVINRILKIH NSSKILTRFE
201: EYREFVKAKA ARSNGGGRRW DDERCVADGN ELLRFYCSTF MCDLGQNGKS NLCGHQYCSI CGIIGSGFSP KLDGIATLAT GWRGHVAVPE EVEEEFGFMN
301: VKRAMLVCRV VAGRVGCDLI DDDDVDKSDG GGYDSLVGQS GNKSGALLRI DDDELLVFNP RAVLPCFVIV YTV
101: TTNQPDPETR IHQQTEFEIS SSDEIFPCNS CGEIFPKINL LENHIAIKHA VSELIAGESS TNIVKIIFKS GWPEQGNYKS PVINRILKIH NSSKILTRFE
201: EYREFVKAKA ARSNGGGRRW DDERCVADGN ELLRFYCSTF MCDLGQNGKS NLCGHQYCSI CGIIGSGFSP KLDGIATLAT GWRGHVAVPE EVEEEFGFMN
301: VKRAMLVCRV VAGRVGCDLI DDDDVDKSDG GGYDSLVGQS GNKSGALLRI DDDELLVFNP RAVLPCFVIV YTV
Arabidopsis Description
At2g29660 [Source:UniProtKB/TrEMBL;Acc:O82389]
SUBAcon: [plasma membrane,golgi]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.