Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97964 | Canola | cytosol | 94.97 | 94.71 |
| AT1G11490.2 | Thale cress | mitochondrion | 74.58 | 73.15 |
| GSMUA_Achr6P24320_001 | Banana | cytosol | 34.64 | 36.8 |
| CDY29286 | Canola | nucleus | 41.62 | 36.25 |
| CDX89265 | Canola | nucleus | 41.9 | 35.13 |
| GSMUA_Achr9P24720_001 | Banana | cytosol | 34.92 | 34.63 |
| CDY06635 | Canola | nucleus | 39.39 | 32.05 |
| CDY28761 | Canola | nucleus | 39.39 | 31.54 |
| KRH10693 | Soybean | nucleus | 34.64 | 31.16 |
| TraesCS3D01G317900.1 | Wheat | nucleus | 41.34 | 30.77 |
| HORVU3Hr1G077490.2 | Barley | nucleus | 41.62 | 30.72 |
| KRH21644 | Soybean | nucleus | 34.08 | 30.58 |
| TraesCS3B01G353600.1 | Wheat | nucleus | 41.06 | 30.25 |
| Zm00001d012605_P001 | Maize | nucleus | 42.18 | 30.14 |
| Os01t0785900-01 | Rice | mitochondrion, nucleus, peroxisome, plastid | 40.78 | 30.1 |
| CDY18344 | Canola | nucleus | 37.99 | 30.02 |
| EER88828 | Sorghum | cytosol | 35.47 | 29.4 |
| Os06t0683000-01 | Rice | cytosol, nucleus, plastid | 37.99 | 29.25 |
| Zm00001d014485_P001 | Maize | nucleus, plastid | 35.75 | 29.22 |
| TraesCS3A01G324600.1 | Wheat | nucleus | 41.34 | 29.19 |
| CDY63658 | Canola | cytosol | 22.63 | 29.14 |
| Zm00001d043243_P001 | Maize | nucleus | 41.06 | 29.11 |
| CDY16714 | Canola | cytosol | 22.35 | 28.78 |
| KRH58632 | Soybean | nucleus | 29.05 | 28.73 |
| CDY42181 | Canola | cytosol | 20.67 | 28.68 |
| CDX76365 | Canola | cytosol | 20.67 | 28.68 |
| EES03733 | Sorghum | nucleus | 41.62 | 28.49 |
| CDY19564 | Canola | nucleus | 20.11 | 27.27 |
| CDY12954 | Canola | nucleus | 19.55 | 26.52 |
| CDY20903 | Canola | nucleus, plastid | 31.01 | 26.49 |
| CDX73189 | Canola | nucleus | 31.56 | 26.34 |
| CDY06723 | Canola | nucleus, plastid | 30.45 | 26.01 |
| CDY47503 | Canola | nucleus | 31.28 | 25.69 |
| CDY39052 | Canola | nucleus | 30.73 | 24.66 |
| CDY16999 | Canola | nucleus, plastid | 28.21 | 24.4 |
| CDY17799 | Canola | nucleus, plastid | 29.33 | 24.19 |
| CDY13543 | Canola | nucleus | 29.05 | 24.07 |
| CDY51355 | Canola | golgi | 24.58 | 23.72 |
| CDX97869 | Canola | golgi | 24.3 | 23.64 |
| CDY02000 | Canola | golgi | 24.02 | 22.87 |
| CDY45464 | Canola | golgi | 24.02 | 18.53 |
Protein Annotations
| EnsemblPlants:CDY49785 | EnsemblPlantsGene:GSBRNA2T00093805001 | Gene3D:3.90.228.10 | GO:A0A078IFV6 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF23 |
| ProteinID:CDY49785 | ProteinID:CDY49785.1 | SEG:seg | SUPFAM:SSF56399 | UniParc:UPI0004EDC3A5 | UniProt:A0A078IFV6 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
BnaCnng17980DBnaCnng17980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFV6]
Coordinates
chrLK032859:-:11346..12493
Molecular Weight (calculated)
39508.5 Da
IEP (calculated)
9.267
GRAVY (calculated)
-0.252
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGVWLYLKK SLSCCDAQKP SDPENNLIQE MKNPSGCRRS MSNLRNEFVA YGDEGAMQNP SFRCSRSLES SKFINTMRFE GSGGASSSDL LSGRYSSERF
101: DVIGSDICGF GALSCRICRQ RVRDLYAFET HYLTNHSVTR LLEGDFSRTT VELICNRGYS DKLGKTKGCN VSAILKVQNL QRVVAEFENY RELVKIRATK
201: LSKKHSRCVA DGNEFLGFHG TTLSCSLGLS SNSGSSNLCF SDQCGVCKIL RHGFASKTRQ DGIKGVLTAS ACSAALEGIE MERGRSRGAL RAVVLCRVIA
301: GRVHKPMKKF EDPNVFSEFG SLALKVGPNA ILEELYLLST KALLPCFVIV FKPRNNTS
101: DVIGSDICGF GALSCRICRQ RVRDLYAFET HYLTNHSVTR LLEGDFSRTT VELICNRGYS DKLGKTKGCN VSAILKVQNL QRVVAEFENY RELVKIRATK
201: LSKKHSRCVA DGNEFLGFHG TTLSCSLGLS SNSGSSNLCF SDQCGVCKIL RHGFASKTRQ DGIKGVLTAS ACSAALEGIE MERGRSRGAL RAVVLCRVIA
301: GRVHKPMKKF EDPNVFSEFG SLALKVGPNA ILEELYLLST KALLPCFVIV FKPRNNTS
001: MRGVWLYLKK SLSCCKAQKS TVACDPDKIQ IQKKENPSGC SRRSMSNLRD VFVTNGDEGA MQNVSCCSSR SLESSRFVNT VKFEENAGYS DRFKGLLSGA
101: SSSDLLPGRC SERFDVVGSD ICGFGVLACQ KCHERVRDLD AFEAHYLSNH SVVRLLAGDF SRTTVELICN TGYSHKLGKM KGNNISAIFK IQNLQRVVAD
201: FEDYRELVKI RANKLSKKHS RCMADGNEFL GFHGTTLSCT LGFSNSSSNL CFSDHCEVCH ILRHGFSPKT RPDGIKGVLT ASTSSTALES IETDQGRNRG
301: SLIAVVLCRV IAGRVHKPMQ TFENSLGFSE FDSLALKVGQ NSRIEELYLL STKALLPCFV IIFKP
101: SSSDLLPGRC SERFDVVGSD ICGFGVLACQ KCHERVRDLD AFEAHYLSNH SVVRLLAGDF SRTTVELICN TGYSHKLGKM KGNNISAIFK IQNLQRVVAD
201: FEDYRELVKI RANKLSKKHS RCMADGNEFL GFHGTTLSCT LGFSNSSSNL CFSDHCEVCH ILRHGFSPKT RPDGIKGVLT ASTSSTALES IETDQGRNRG
301: SLIAVVLCRV IAGRVHKPMQ TFENSLGFSE FDSLALKVGQ NSRIEELYLL STKALLPCFV IIFKP
Arabidopsis Description
Uncharacterized protein At1g11490 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUU5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.