Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 7
- plastid 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51355 | Canola | golgi | 92.39 | 91.64 |
| CDY02000 | Canola | golgi | 85.33 | 83.51 |
| AT2G29660.1 | Thale cress | golgi, plasma membrane | 82.07 | 80.97 |
| CDY45464 | Canola | golgi | 85.87 | 68.1 |
| VIT_06s0004g06240.t01 | Wine grape | plastid | 54.08 | 59.76 |
| PGSC0003DMT400078031 | Potato | extracellular, vacuole | 52.45 | 51.88 |
| KRG98330 | Soybean | endoplasmic reticulum, golgi | 52.99 | 51.05 |
| Solyc06g076820.1.1 | Tomato | extracellular, vacuole | 52.45 | 50.79 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 39.13 | 38.81 |
| TraesCS4A01G089900.1 | Wheat | endoplasmic reticulum, golgi | 41.85 | 35.65 |
| EER92505 | Sorghum | extracellular, plasma membrane | 44.02 | 35.6 |
| TraesCS4D01G215000.1 | Wheat | golgi | 41.58 | 35.42 |
| TraesCS4B01G214400.1 | Wheat | golgi | 41.3 | 35.1 |
| HORVU4Hr1G061070.1 | Barley | golgi | 41.58 | 34.77 |
| Zm00001d028537_P001 | Maize | endoplasmic reticulum, plasma membrane | 42.12 | 33.55 |
| Os03t0264600-00 | Rice | endoplasmic reticulum, nucleus | 42.12 | 33.26 |
| CDY12954 | Canola | nucleus | 23.1 | 32.2 |
| CDY19564 | Canola | nucleus | 22.83 | 31.82 |
| CDX76365 | Canola | cytosol | 21.74 | 31.01 |
| CDY42181 | Canola | cytosol | 21.47 | 30.62 |
| CDY20903 | Canola | nucleus, plastid | 33.15 | 29.12 |
| CDY06723 | Canola | nucleus, plastid | 33.15 | 29.12 |
| CDY47503 | Canola | nucleus | 33.7 | 28.44 |
| CDX73189 | Canola | nucleus | 33.15 | 28.44 |
| CDY63658 | Canola | cytosol | 21.47 | 28.42 |
| CDY16714 | Canola | cytosol | 21.47 | 28.42 |
| CDY13543 | Canola | nucleus | 33.15 | 28.24 |
| CDY39052 | Canola | nucleus | 33.42 | 27.58 |
| CDY29286 | Canola | nucleus | 30.71 | 27.49 |
| CDX89265 | Canola | nucleus | 30.71 | 26.46 |
| CDY06635 | Canola | nucleus | 31.25 | 26.14 |
| CDY16999 | Canola | nucleus, plastid | 29.35 | 26.09 |
| CDY28761 | Canola | nucleus | 31.52 | 25.95 |
| CDY17799 | Canola | nucleus, plastid | 30.16 | 25.58 |
| CDY18344 | Canola | nucleus | 30.98 | 25.17 |
| CDY49785 | Canola | cytosol | 23.64 | 24.3 |
| CDX97964 | Canola | cytosol | 23.37 | 23.96 |
Protein Annotations
| EnsemblPlants:CDX97869 | EnsemblPlantsGene:GSBRNA2T00105203001 | Gene3D:3.90.228.10 | GO:A0A078EAR0 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF24 | PFscan:PS50157 |
| PFscan:PS51257 | ProteinID:CDX97869 | ProteinID:CDX97869.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF56399 |
| UniParc:UPI0004EEB918 | MapMan:15.5.15 | : | : | : | : |
Description
BnaC04g40700D
Coordinates
chrLK031901:-:1145059..1146273
Molecular Weight (calculated)
40407.2 Da
IEP (calculated)
8.328
GRAVY (calculated)
-0.255
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQKLGSLL RQHFFSLFFL FVGCFLFPKG SDCKHKKRKK KNLRTVSSGS GSGLSSPWSS LKRFYLSTTR ISKPRSQTHP NGQLTTLTSA RSSHNSLVTL
101: IQPDPETRNE SDSPLSDEIF SCATCGEVFP KTNLLEHHIA VKHAVTELTD GESSTNIVKI IFKSGWPDLN NKAPEIHRIL KIHNSPKILA RFEEYREFVK
201: AKAARSCSGG GGRRRDDERC VADGNELLRF YCSTFMCDLG QNGNSSLCGH QYCSVCGIIG SGFSPKLDGI ATLATGWRGH AAVPEEVEEE FGFMNVKRAM
301: LVCRVVAGRV GCDLIADDDV DKRDGGYDSL VGEGSGSKSG ALLRIDDEEL LVFNPRAVLP CFVIVYTV
101: IQPDPETRNE SDSPLSDEIF SCATCGEVFP KTNLLEHHIA VKHAVTELTD GESSTNIVKI IFKSGWPDLN NKAPEIHRIL KIHNSPKILA RFEEYREFVK
201: AKAARSCSGG GGRRRDDERC VADGNELLRF YCSTFMCDLG QNGNSSLCGH QYCSVCGIIG SGFSPKLDGI ATLATGWRGH AAVPEEVEEE FGFMNVKRAM
301: LVCRVVAGRV GCDLIADDDV DKRDGGYDSL VGEGSGSKSG ALLRIDDEEL LVFNPRAVLP CFVIVYTV
001: MAARKLGSLL RQYFFSLCFL FLGCFFFPKD ADYKQKRRKK KLRRVSSSSG SSLSSSWTYL KRVFLSTTRI SKSRNQTHPN VTLTSARSSQ NSLVTLVQPD
101: TTNQPDPETR IHQQTEFEIS SSDEIFPCNS CGEIFPKINL LENHIAIKHA VSELIAGESS TNIVKIIFKS GWPEQGNYKS PVINRILKIH NSSKILTRFE
201: EYREFVKAKA ARSNGGGRRW DDERCVADGN ELLRFYCSTF MCDLGQNGKS NLCGHQYCSI CGIIGSGFSP KLDGIATLAT GWRGHVAVPE EVEEEFGFMN
301: VKRAMLVCRV VAGRVGCDLI DDDDVDKSDG GGYDSLVGQS GNKSGALLRI DDDELLVFNP RAVLPCFVIV YTV
101: TTNQPDPETR IHQQTEFEIS SSDEIFPCNS CGEIFPKINL LENHIAIKHA VSELIAGESS TNIVKIIFKS GWPEQGNYKS PVINRILKIH NSSKILTRFE
201: EYREFVKAKA ARSNGGGRRW DDERCVADGN ELLRFYCSTF MCDLGQNGKS NLCGHQYCSI CGIIGSGFSP KLDGIATLAT GWRGHVAVPE EVEEEFGFMN
301: VKRAMLVCRV VAGRVGCDLI DDDDVDKSDG GGYDSLVGQS GNKSGALLRI DDDELLVFNP RAVLPCFVIV YTV
Arabidopsis Description
At2g29660 [Source:UniProtKB/TrEMBL;Acc:O82389]
SUBAcon: [plasma membrane,golgi]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.