Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12954 | Canola | nucleus | 96.97 | 96.97 |
| AT1G62520.1 | Thale cress | nucleus | 85.23 | 80.36 |
| Solyc08g079010.1.1 | Tomato | cytosol | 35.61 | 59.49 |
| VIT_02s0154g00220.t01 | Wine grape | cytosol | 59.85 | 55.24 |
| KRH28045 | Soybean | mitochondrion | 57.2 | 52.98 |
| CDY42181 | Canola | cytosol | 51.52 | 52.71 |
| CDX76365 | Canola | cytosol | 51.14 | 52.33 |
| KRH77393 | Soybean | mitochondrion | 55.3 | 51.41 |
| KRH04088 | Soybean | cytosol | 56.44 | 51.2 |
| CDY16714 | Canola | cytosol | 53.41 | 50.72 |
| KRH57359 | Soybean | cytosol | 54.92 | 50.7 |
| CDY63658 | Canola | cytosol | 53.03 | 50.36 |
| PGSC0003DMT400012224 | Potato | nucleus | 55.68 | 49.16 |
| Os10t0554001-01 | Rice | cytosol | 30.3 | 43.96 |
| GSMUA_Achr2P10020_001 | Banana | cytosol | 43.94 | 43.28 |
| GSMUA_Achr5P15290_001 | Banana | nucleus | 40.53 | 42.13 |
| TraesCS5A01G536800.1 | Wheat | cytosol | 29.92 | 41.15 |
| GSMUA_Achr7P07110_001 | Banana | cytosol | 42.42 | 40.58 |
| GSMUA_Achr4P30380_001 | Banana | cytosol | 42.8 | 39.93 |
| GSMUA_Achr4P27010_001 | Banana | plastid | 43.18 | 39.86 |
| KRH37293 | Soybean | plastid | 23.11 | 39.61 |
| GSMUA_Achr1P01700_001 | Banana | nucleus | 43.56 | 38.98 |
| GSMUA_Achr5P13520_001 | Banana | cytosol, mitochondrion, peroxisome | 39.77 | 35.59 |
| TraesCS6B01G276600.1 | Wheat | plastid | 37.5 | 35.36 |
| TraesCS6D01G230200.1 | Wheat | plastid | 37.5 | 35.36 |
| TraesCS6A01G248100.1 | Wheat | plastid | 36.74 | 35.02 |
| Zm00001d017504_P001 | Maize | mitochondrion | 38.64 | 34.81 |
| HORVU6Hr1G063400.2 | Barley | plastid | 36.74 | 34.52 |
| KXG31078 | Sorghum | plastid | 39.77 | 33.23 |
| TraesCS1D01G214000.1 | Wheat | mitochondrion, plastid | 34.47 | 31.49 |
| Zm00001d047106_P001 | Maize | plastid | 35.23 | 31.42 |
| TraesCS1B01G224700.1 | Wheat | mitochondrion, plastid | 34.85 | 31.4 |
| Os02t0661600-00 | Rice | mitochondrion | 36.36 | 31.37 |
| HORVU1Hr1G053950.1 | Barley | mitochondrion, plastid | 34.47 | 30.95 |
| TraesCS1A01G210700.1 | Wheat | mitochondrion, plastid | 34.09 | 30.72 |
| Zm00001d029869_P001 | Maize | mitochondrion | 35.23 | 30.29 |
| TraesCS4B01G369900.1 | Wheat | plastid | 34.85 | 29.39 |
| TraesCS4D01G361200.1 | Wheat | plastid | 34.09 | 29.22 |
| KXG38947 | Sorghum | mitochondrion | 34.85 | 28.75 |
| CDY29286 | Canola | nucleus | 35.61 | 22.87 |
| CDX97869 | Canola | golgi | 31.82 | 22.83 |
| CDY51355 | Canola | golgi | 31.82 | 22.64 |
| CDY02000 | Canola | golgi | 31.82 | 22.34 |
| CDX89265 | Canola | nucleus | 35.98 | 22.25 |
| CDY06635 | Canola | nucleus | 35.61 | 21.36 |
| CDY28761 | Canola | nucleus | 35.61 | 21.03 |
| CDX97964 | Canola | cytosol | 28.03 | 20.61 |
| CDY18344 | Canola | nucleus | 34.85 | 20.31 |
| CDY49785 | Canola | cytosol | 27.27 | 20.11 |
| CDY16999 | Canola | nucleus, plastid | 31.44 | 20.05 |
| CDX73189 | Canola | nucleus | 31.82 | 19.58 |
| CDY06723 | Canola | nucleus, plastid | 31.06 | 19.57 |
| CDY20903 | Canola | nucleus, plastid | 31.06 | 19.57 |
| CDY47503 | Canola | nucleus | 32.2 | 19.5 |
| CDY17799 | Canola | nucleus, plastid | 31.06 | 18.89 |
| CDY13543 | Canola | nucleus | 30.68 | 18.75 |
| CDY39052 | Canola | nucleus | 30.68 | 18.16 |
| CDY45464 | Canola | golgi | 31.82 | 18.1 |
Protein Annotations
| EnsemblPlants:CDY19564 | EnsemblPlantsGene:GSBRNA2T00009212001 | Gene3D:3.90.228.10 | GO:A0A078G2B0 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF12 |
| PFscan:PS51257 | ProteinID:CDY19564 | ProteinID:CDY19564.1 | SEG:seg | SUPFAM:SSF56399 | UniParc:UPI0004EE0DF3 |
| UniProt:A0A078G2B0 | MapMan:15.5.15 | : | : | : | : |
Description
BnaC09g13390DBnaC09g13390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2B0]
Coordinates
chrLK032097:+:700854..701648
Molecular Weight (calculated)
29235.1 Da
IEP (calculated)
10.285
GRAVY (calculated)
-0.514
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGWVKSWQ CKSKAFDDVY NPNPIHLMSS YSCRRSTQNL KDVINTKKTK PKPKPKKQES DPVSSPSTRI RSSVVRDPLL PTLTELAEGH QSRNVVEIIF
101: QTSWGPKPFP GRIDMIFKVQ NGSKTMTRFE EYREAVKTKS VGKSREDNAR SVADGNETMR FYCLGPSYGG GAWGILGGKG GGASIYTFAG SCMAHEKAGG
201: GKGRKAMLVC RVIAGRVMKR NELRYDSVDS DVRSRFDSLS GGDGELLVFD TRAVLPCFLI VYRL
101: QTSWGPKPFP GRIDMIFKVQ NGSKTMTRFE EYREAVKTKS VGKSREDNAR SVADGNETMR FYCLGPSYGG GAWGILGGKG GGASIYTFAG SCMAHEKAGG
201: GKGRKAMLVC RVIAGRVMKR NELRYDSVDS DVRSRFDSLS GGDGELLVFD TRAVLPCFLI VYRL
001: MANGWVKSLQ CKSKAFDDVY NPIKNPNPNP SPSPKHLMSS YSCRKSTQSL KDVIETKKPK PKPKKPNPKP DKRETDPVLS PSTRIRSTGV RDRDPFLPTL
101: TELSEGHQSR NVVEIIFQTS WGPKPFSGRV EMIFKVQNGS KTLTRFEEYR EAVKARSVGK AREENARSVA DGNETMRFYC LGPSYGGGGS AWGILGGKGG
201: GASIYTFAGS STANEKAGGG KGRKAMLVCR VIAGRVTKQN ELKYDSDLRS RFDSVSGDDG ELLVFDTRAV LPCFLIIYRL
101: TELSEGHQSR NVVEIIFQTS WGPKPFSGRV EMIFKVQNGS KTLTRFEEYR EAVKARSVGK AREENARSVA DGNETMRFYC LGPSYGGGGS AWGILGGKGG
201: GASIYTFAGS STANEKAGGG KGRKAMLVCR VIAGRVTKQN ELKYDSDLRS RFDSVSGDDG ELLVFDTRAV LPCFLIIYRL
Arabidopsis Description
Sulfated surface-like glycoprotein [Source:UniProtKB/TrEMBL;Acc:Q9SXE5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.