Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G224700.1 | Wheat | mitochondrion, plastid | 97.23 | 95.9 |
| TraesCS1A01G210700.1 | Wheat | mitochondrion, plastid | 95.5 | 94.2 |
| HORVU1Hr1G053950.1 | Barley | mitochondrion, plastid | 93.43 | 91.84 |
| Os10t0554001-01 | Rice | cytosol | 49.48 | 78.57 |
| Zm00001d047106_P001 | Maize | plastid | 68.17 | 66.55 |
| Zm00001d029869_P001 | Maize | mitochondrion | 70.59 | 66.45 |
| KXG38947 | Sorghum | mitochondrion | 70.93 | 64.06 |
| GSMUA_Achr5P15290_001 | Banana | nucleus | 44.64 | 50.79 |
| TraesCS4D01G361200.1 | Wheat | plastid | 53.63 | 50.32 |
| GSMUA_Achr2P10020_001 | Banana | cytosol | 45.67 | 49.25 |
| GSMUA_Achr4P30380_001 | Banana | cytosol | 45.67 | 46.64 |
| GSMUA_Achr4P27010_001 | Banana | plastid | 46.02 | 46.5 |
| GSMUA_Achr7P07110_001 | Banana | cytosol | 44.29 | 46.38 |
| GSMUA_Achr1P01700_001 | Banana | nucleus | 46.37 | 45.42 |
| Solyc08g079010.1.1 | Tomato | cytosol | 24.22 | 44.3 |
| GSMUA_Achr5P13520_001 | Banana | cytosol, mitochondrion, peroxisome | 44.64 | 43.73 |
| TraesCS6D01G230200.1 | Wheat | plastid | 40.83 | 42.14 |
| KRH57359 | Soybean | cytosol | 38.75 | 39.16 |
| KRH28045 | Soybean | mitochondrion | 37.72 | 38.25 |
| KRH04088 | Soybean | cytosol | 38.41 | 38.14 |
| VIT_02s0154g00220.t01 | Wine grape | cytosol | 37.72 | 38.11 |
| KRH77393 | Soybean | mitochondrion | 36.68 | 37.32 |
| AT4G12450.1 | Thale cress | cytosol | 35.29 | 36.82 |
| PGSC0003DMT400012224 | Potato | nucleus | 38.06 | 36.79 |
| AT1G62520.1 | Thale cress | nucleus | 35.64 | 36.79 |
| CDY63658 | Canola | cytosol | 34.95 | 36.33 |
| CDY16714 | Canola | cytosol | 34.6 | 35.97 |
| Bra029455.1-P | Field mustard | cytosol | 34.6 | 35.97 |
| CDX76365 | Canola | cytosol | 31.83 | 35.66 |
| Bra020842.1-P | Field mustard | cytosol | 31.83 | 35.66 |
| CDY42181 | Canola | cytosol | 31.83 | 35.66 |
| AT4G22560.1 | Thale cress | cytosol, plastid | 32.18 | 35.23 |
| CDY19564 | Canola | nucleus | 31.49 | 34.47 |
| CDY12954 | Canola | nucleus | 31.49 | 34.47 |
| Bra027038.1-P | Field mustard | cytosol, plastid | 31.14 | 34.09 |
| KRH37293 | Soybean | plastid | 15.22 | 28.57 |
| TraesCS3D01G317900.1 | Wheat | nucleus | 31.14 | 18.71 |
| TraesCS4D01G108700.1 | Wheat | nucleus | 28.03 | 18.54 |
| TraesCS4D01G215000.1 | Wheat | golgi | 26.99 | 18.06 |
| TraesCS2D01G004200.1 | Wheat | nucleus, plastid | 29.41 | 17.31 |
| TraesCS2D01G580400.1 | Wheat | nucleus | 29.76 | 17.17 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G214000.1 | EnsemblPlantsGene:TraesCS1D01G214000 | Gene3D:3.90.228.10 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF6 | SEG:seg |
| SUPFAM:SSF56399 | MapMan:15.5.15 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:299051644..299052773
Molecular Weight (calculated)
30537.6 Da
IEP (calculated)
10.857
GRAVY (calculated)
-0.211
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAWVRSLS CRSYGVADAV VAPSPSKKAQ PLLPASCGAA ADVRDSVASA RQAWKQQKPR RERRRDGQER QQELARPRPK KKPKQTAAAF MPSPATAPAS
101: SAFLTMAELP EGHSSRQVVE LIFSSGWDLT ATAPPEVEAM FRVHSGARAV ARFEEARAAA RAHGAAARCG ADGNEMMRFQ CRPAAGAGVG GVFGAGVATC
201: QLGPSSSAVR TFACSGTAHA RAAPSPGAVR RAMLVCRVIA GRVRPAHGDD PLALRHRSSH YDSVDMGNGE LVVLDSRAVL PCFLIIYKV
101: SAFLTMAELP EGHSSRQVVE LIFSSGWDLT ATAPPEVEAM FRVHSGARAV ARFEEARAAA RAHGAAARCG ADGNEMMRFQ CRPAAGAGVG GVFGAGVATC
201: QLGPSSSAVR TFACSGTAHA RAAPSPGAVR RAMLVCRVIA GRVRPAHGDD PLALRHRSSH YDSVDMGNGE LVVLDSRAVL PCFLIIYKV
001: MANGWVKSLQ CKSKAFDDVY NPIKNPNPNP SPSPKHLMSS YSCRKSTQSL KDVIETKKPK PKPKKPNPKP DKRETDPVLS PSTRIRSTGV RDRDPFLPTL
101: TELSEGHQSR NVVEIIFQTS WGPKPFSGRV EMIFKVQNGS KTLTRFEEYR EAVKARSVGK AREENARSVA DGNETMRFYC LGPSYGGGGS AWGILGGKGG
201: GASIYTFAGS STANEKAGGG KGRKAMLVCR VIAGRVTKQN ELKYDSDLRS RFDSVSGDDG ELLVFDTRAV LPCFLIIYRL
101: TELSEGHQSR NVVEIIFQTS WGPKPFSGRV EMIFKVQNGS KTLTRFEEYR EAVKARSVGK AREENARSVA DGNETMRFYC LGPSYGGGGS AWGILGGKGG
201: GASIYTFAGS STANEKAGGG KGRKAMLVCR VIAGRVTKQN ELKYDSDLRS RFDSVSGDDG ELLVFDTRAV LPCFLIIYRL
Arabidopsis Description
Sulfated surface-like glycoprotein [Source:UniProtKB/TrEMBL;Acc:Q9SXE5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.