CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95394
KRG97711
KRG99083
KRH14933
KRH16959
KRH24006
KRH27646
KRH27971
KRH28419
KRH29310
KRH31163
KRH53667
KRH57983
KRH64261
KRH67075
KRH73205
KRH77058
KRH77487
KRH77849

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G12450.1	KRG99083	AT1G05410.1	21798944
AT4G12450.1	KRH27646	AT1G05410.1	21798944
AT4G12450.1	KRH77849	AT1G05410.1	21798944
AT4G12450.1	KRG95394	AT2G19650.1	21798944
AT4G12450.1	KRH67075	AT2G19650.1	21798944
AT4G12450.1	KRH28419	AT2G23290.1	21798944
AT4G12450.1	KRH57983	AT2G23290.1	21798944
AT4G12450.1	KRH77058	AT2G23290.1	21798944
AT4G12450.1	KRG97711	AT3G08530.1	21798944
AT4G12450.1	KRH14933	AT3G08530.1	21798944
AT4G12450.1	KRH31163	AT3G08530.1	21798944
AT4G12450.1	KRH73205	AT3G08530.1	21798944
AT4G12450.1	KRH24006	AT3G48150.1	21798944
AT4G12450.1	KRH27971	AT3G48150.1	21798944
AT4G12450.1	KRH29310	AT3G48150.1	21798944
AT4G12450.1	KRH77487	AT3G48150.1	21798944
AT4G12450.1	KRH16959	AT3G49580.1	21798944
AT4G12450.1	KRH53667	AT3G49580.1	21798944
AT4G12450.1	KRH64261	AT3G49580.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04088	Soybean	cytosol	71.43	37.8
KRH57359	Soybean	cytosol	68.83	37.06
KRH28045	Soybean	mitochondrion	53.25	28.77
KRH77393	Soybean	mitochondrion	51.3	27.82
Bra027038.1-P	Field mustard	cytosol, plastid	41.56	24.24
CDY12954	Canola	nucleus	41.56	24.24
AT1G62520.1	Thale cress	nucleus	43.51	23.93
CDY19564	Canola	nucleus	39.61	23.11
VIT_02s0154g00220.t01	Wine grape	cytosol	42.21	22.73
Bra020842.1-P	Field mustard	cytosol	36.36	21.71
CDX76365	Canola	cytosol	36.36	21.71
CDY42181	Canola	cytosol	35.71	21.32
Os10t0554001-01	Rice	cytosol	24.68	20.88
AT4G22560.1	Thale cress	cytosol, plastid	35.71	20.83
AT4G12450.1	Thale cress	cytosol	37.01	20.58
CDY63658	Canola	cytosol	37.01	20.5
CDY16714	Canola	cytosol	36.36	20.14
Bra029455.1-P	Field mustard	cytosol	36.36	20.14
TraesCS5A01G536800.1	Wheat	cytosol	24.68	19.79
PGSC0003DMT400012224	Potato	nucleus	38.31	19.73
Solyc08g079010.1.1	Tomato	cytosol	17.53	17.09
GSMUA_Achr2P10020_001	Banana	cytosol	29.22	16.79
GSMUA_Achr5P15290_001	Banana	nucleus	26.62	16.14
GSMUA_Achr4P30380_001	Banana	cytosol	29.22	15.9
GSMUA_Achr4P27010_001	Banana	plastid	28.57	15.38
TraesCS1D01G214000.1	Wheat	mitochondrion, plastid	28.57	15.22
GSMUA_Achr7P07110_001	Banana	cytosol	27.27	15.22
Zm00001d047106_P001	Maize	plastid	29.22	15.2
TraesCS1B01G224700.1	Wheat	mitochondrion, plastid	28.57	15.02
TraesCS6A01G248100.1	Wheat	plastid	25.97	14.44
TraesCS4B01G369900.1	Wheat	plastid	29.22	14.38
Zm00001d017504_P001	Maize	mitochondrion	27.27	14.33
TraesCS1A01G210700.1	Wheat	mitochondrion, plastid	27.27	14.33
Zm00001d029869_P001	Maize	mitochondrion	28.57	14.33
TraesCS6D01G230200.1	Wheat	plastid	25.97	14.29
TraesCS6B01G276600.1	Wheat	plastid	25.97	14.29
TraesCS4D01G361200.1	Wheat	plastid	28.57	14.29
GSMUA_Achr1P01700_001	Banana	nucleus	27.27	14.24
HORVU6Hr1G063400.2	Barley	plastid	25.97	14.23
KXG38947	Sorghum	mitochondrion	28.57	13.75
HORVU1Hr1G053950.1	Barley	mitochondrion, plastid	25.97	13.61
GSMUA_Achr5P13520_001	Banana	cytosol, mitochondrion, peroxisome	25.97	13.56
KRH73867	Soybean	cytosol	12.99	13.24
KXG31078	Sorghum	plastid	26.62	12.97
Os02t0661600-00	Rice	mitochondrion	24.03	12.09
KRH14275	Soybean	cytosol	20.78	11.98
KRH25897	Soybean	cytosol	12.99	11.24
KRH05942	Soybean	nucleus	29.22	10.79
KRH27121	Soybean	cytosol, plastid	30.52	10.78
KRH22216	Soybean	cytosol, plastid	30.52	10.71
KRH55605	Soybean	cytosol	30.52	10.66
KRH17425	Soybean	nucleus	28.57	10.63
KRH53192	Soybean	nucleus	27.92	10.17
KRG98330	Soybean	endoplasmic reticulum, golgi	24.68	9.95
KRH64726	Soybean	nucleus	27.27	9.86
KRH21644	Soybean	nucleus	20.13	7.77
KRH10693	Soybean	nucleus	19.48	7.54
KRH58632	Soybean	nucleus	16.23	6.91

Protein Annotations

EMBL:ACUP02005437	EnsemblPlants:KRH37293	EnsemblPlantsGene:GLYMA_09G057200	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR31681	PANTHER:PTHR31681:SF12	ProteinID:KRH37293	ProteinID:KRH37293.1	SEG:seg	UniParc:UPI000295BAC8
UniProt:K7LC02	MapMan:15.5.15	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:5161773..5163333

Molecular Weight (calculated)

17483.6 Da

IEP (calculated)

8.917

GRAVY (calculated)

-0.668

Length

154 amino acids

Sequence
(BLAST)

001: MNHHTQNHNN PNHDKVIIRT PKHPSSKYSS STTKPEFKAR TTMTRSRSST TTTITSLCGI IELLEGHPSH NVVEIIFHTS WGPKPFPGRV ELIFKVQRAS
101: HTLARFEEFR KAMKARATAG LAEGNDDEEN TWCIADGNEV MWFHCLIQSN ISEK

Best Arabidopsis Sequence Match ( AT1G62520.1 )
(BLAST)

001: MANGWVKSLQ CKSKAFDDVY NPIKNPNPNP SPSPKHLMSS YSCRKSTQSL KDVIETKKPK PKPKKPNPKP DKRETDPVLS PSTRIRSTGV RDRDPFLPTL
101: TELSEGHQSR NVVEIIFQTS WGPKPFSGRV EMIFKVQNGS KTLTRFEEYR EAVKARSVGK AREENARSVA DGNETMRFYC LGPSYGGGGS AWGILGGKGG
201: GASIYTFAGS STANEKAGGG KGRKAMLVCR VIAGRVTKQN ELKYDSDLRS RFDSVSGDDG ELLVFDTRAV LPCFLIIYRL

Arabidopsis Description

Sulfated surface-like glycoprotein [Source:UniProtKB/TrEMBL;Acc:Q9SXE5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.