Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27121 | Soybean | cytosol, plastid | 94.99 | 95.64 |
| KRH25897 | Soybean | cytosol | 36.9 | 91.01 |
| KRH55605 | Soybean | cytosol | 88.38 | 87.98 |
| VIT_19s0014g05000.t01 | Wine grape | cytosol, plastid | 82.69 | 84.62 |
| Solyc07g063970.2.1 | Tomato | cytosol, nucleus, peroxisome | 76.99 | 79.16 |
| PGSC0003DMT400049491 | Potato | cytosol, nucleus, peroxisome | 77.45 | 79.07 |
| CDY29286 | Canola | nucleus | 64.69 | 69.1 |
| CDY06635 | Canola | nucleus | 68.34 | 68.18 |
| CDY28761 | Canola | nucleus | 69.02 | 67.79 |
| Bra026366.1-P | Field mustard | nucleus | 64.46 | 66.43 |
| CDX89265 | Canola | nucleus | 64.46 | 66.28 |
| Bra022735.1-P | Field mustard | nucleus | 70.84 | 65.75 |
| AT5G54630.1 | Thale cress | nucleus | 70.61 | 65.68 |
| AT4G27240.1 | Thale cress | nucleus | 64.46 | 65.66 |
| CDY18344 | Canola | nucleus | 65.6 | 63.58 |
| Os01t0785900-01 | Rice | mitochondrion, nucleus, peroxisome, plastid | 67.65 | 61.24 |
| TraesCS3D01G317900.1 | Wheat | nucleus | 65.38 | 59.67 |
| TraesCS3B01G353600.1 | Wheat | nucleus | 64.92 | 58.64 |
| HORVU3Hr1G077490.2 | Barley | nucleus | 64.69 | 58.56 |
| Zm00001d043243_P001 | Maize | nucleus | 66.74 | 58.02 |
| Zm00001d012605_P001 | Maize | nucleus | 65.6 | 57.48 |
| EES03733 | Sorghum | nucleus | 66.97 | 56.21 |
| TraesCS3A01G324600.1 | Wheat | nucleus | 64.69 | 56.02 |
| Os06t0683000-01 | Rice | cytosol, nucleus, plastid | 52.62 | 49.68 |
| EER88828 | Sorghum | cytosol | 43.96 | 44.68 |
| Zm00001d014485_P001 | Maize | nucleus, plastid | 44.19 | 44.29 |
| KRH10693 | Soybean | nucleus | 38.27 | 42.21 |
| KRH21644 | Soybean | nucleus | 37.13 | 40.85 |
| KRH17425 | Soybean | nucleus | 35.76 | 37.92 |
| KRH05942 | Soybean | nucleus | 35.76 | 37.65 |
| KRH58632 | Soybean | nucleus | 30.3 | 36.74 |
| KRH73867 | Soybean | cytosol | 12.53 | 36.42 |
| KRH28045 | Soybean | mitochondrion | 22.55 | 34.74 |
| KRH64726 | Soybean | nucleus | 33.03 | 34.04 |
| KRH53192 | Soybean | nucleus | 32.57 | 33.81 |
| KRH04088 | Soybean | cytosol | 22.32 | 33.68 |
| KRH77393 | Soybean | mitochondrion | 21.64 | 33.45 |
| KRH57359 | Soybean | cytosol | 21.18 | 32.52 |
| KRH37293 | Soybean | plastid | 10.71 | 30.52 |
| KRG98330 | Soybean | endoplasmic reticulum, golgi | 26.42 | 30.37 |
| KRH14275 | Soybean | cytosol | 18.22 | 29.96 |
Protein Annotations
| EMBL:ACUP02008394 | EnsemblPlants:KRH22216 | EnsemblPlantsGene:GLYMA_13G285800 | EntrezGene:100800127 | Gene3D:3.90.228.10 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF19 |
| ProteinID:KRH22216 | ProteinID:KRH22216.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF56399 | UniParc:UPI000233BAD1 |
| UniProt:I1M3H0 | MapMan:15.5.15 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:38661529..38663910
Molecular Weight (calculated)
47569.9 Da
IEP (calculated)
9.075
GRAVY (calculated)
-0.347
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTVWFSLKR SLHCKSEPSD VHDPKTRKQL TTIFTKKGGG SSRSGCSRSI ANLKDVIHGS KRHLEKPPSC SPRSIGSSEF LNPITHEVIL SNSRCELKIT
101: GYGGFQEGGV GSDGGGGGAN NGGVNNSSDL STFVGTLRPG TPGPGGHPTM HYFNPSFRTS STPPRKSPFL SSDKEGSGLH GVGVLGPHSS TRVPLETDSN
201: VSSTVTCHKC GEQFNKWEAA EAHHLSKHAV TELVEGDSSR KIVEIICRTS WLKSENQCGR IERVLKVHNM QKTLARFEEY RELVKIKASK LPKKHPRCLA
301: DGNELLRFYG TTVACSLGLS GSSSLCLSEK CCVCRIIRNG FSAKEELKGG IGVFTTSTSG RAFECIEVFD HDPSLRKALI VCRVIAGRVH RPLENIQEMA
401: GQTGFDSLAG KVGLYSNIEE LYLLNARALL PCFVVICKP
101: GYGGFQEGGV GSDGGGGGAN NGGVNNSSDL STFVGTLRPG TPGPGGHPTM HYFNPSFRTS STPPRKSPFL SSDKEGSGLH GVGVLGPHSS TRVPLETDSN
201: VSSTVTCHKC GEQFNKWEAA EAHHLSKHAV TELVEGDSSR KIVEIICRTS WLKSENQCGR IERVLKVHNM QKTLARFEEY RELVKIKASK LPKKHPRCLA
301: DGNELLRFYG TTVACSLGLS GSSSLCLSEK CCVCRIIRNG FSAKEELKGG IGVFTTSTSG RAFECIEVFD HDPSLRKALI VCRVIAGRVH RPLENIQEMA
401: GQTGFDSLAG KVGLYSNIEE LYLLNARALL PCFVVICKP
001: MEDSSKKSQK KKKNKSKNNI PTVWFSLKKS LHCKSEPSDV HDPISTTKQQ QHLSTISTKK ISGISSGGAA VCGGGLSGCS RSIANLKDVI HGSKRHFEKP
101: PISSPRSIGS NEFLNPITHE VILSNSTCEL KITGVGDMAS PVGAADSGGG GGGGNGRSTT YVGMLRPGTP MHYLNHSASY RSQTRKGSFA LSERDRGGGG
201: GGEGLGFHTN RRVSLEMNRE STINGGNNSS VSCHKCGEQF NKLEAAEAHH LSKHAVTELV EGDSSRKIVE IICRTSWLKS ENQCGRIDRV LKVHNMQKTL
301: ARFEEYRETV KIRASKLQKK HPRCLADGNE LLRFHGTTVA CGLGINGSTS VCTAEKCCVC RIIRNGFSSK REKNNGVGVF TASTSGRAFE SILVNGGDES
401: GDVDRTVRKV LIVCRVIAGR VHRPVENVEE MNGLMSGFDS LAGKVGLYTN VEELYLLNPK ALLPCFVVIC KP
101: PISSPRSIGS NEFLNPITHE VILSNSTCEL KITGVGDMAS PVGAADSGGG GGGGNGRSTT YVGMLRPGTP MHYLNHSASY RSQTRKGSFA LSERDRGGGG
201: GGEGLGFHTN RRVSLEMNRE STINGGNNSS VSCHKCGEQF NKLEAAEAHH LSKHAVTELV EGDSSRKIVE IICRTSWLKS ENQCGRIDRV LKVHNMQKTL
301: ARFEEYRETV KIRASKLQKK HPRCLADGNE LLRFHGTTVA CGLGINGSTS VCTAEKCCVC RIIRNGFSSK REKNNGVGVF TASTSGRAFE SILVNGGDES
401: GDVDRTVRKV LIVCRVIAGR VHRPVENVEE MNGLMSGFDS LAGKVGLYTN VEELYLLNPK ALLPCFVVIC KP
Arabidopsis Description
AT5g54630/MRB17_13 [Source:UniProtKB/TrEMBL;Acc:Q9FIU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.