Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g06240.t01 | Wine grape | plastid | 56.54 | 64.86 |
| PGSC0003DMT400078031 | Potato | extracellular, vacuole | 54.97 | 56.45 |
| Solyc06g076820.1.1 | Tomato | extracellular, vacuole | 54.45 | 54.74 |
| CDY02000 | Canola | golgi | 53.66 | 54.52 |
| Bra018369.1-P | Field mustard | extracellular, golgi, plastid | 53.66 | 54.38 |
| CDX97869 | Canola | golgi | 51.05 | 52.99 |
| AT2G29660.1 | Thale cress | golgi, plasma membrane | 51.57 | 52.81 |
| Bra039993.1-P | Field mustard | extracellular, golgi, plastid | 51.05 | 52.42 |
| CDY51355 | Canola | golgi | 50.79 | 52.29 |
| CDY45464 | Canola | golgi | 53.4 | 43.97 |
| KRH25897 | Soybean | cytosol | 20.42 | 43.82 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 39.79 | 40.97 |
| TraesCS4D01G215000.1 | Wheat | golgi | 40.84 | 36.11 |
| TraesCS4B01G214400.1 | Wheat | golgi | 40.84 | 36.03 |
| TraesCS4A01G089900.1 | Wheat | endoplasmic reticulum, golgi | 40.58 | 35.88 |
| HORVU4Hr1G061070.1 | Barley | golgi | 40.58 | 35.23 |
| EER92505 | Sorghum | extracellular, plasma membrane | 41.62 | 34.95 |
| Os03t0264600-00 | Rice | endoplasmic reticulum, nucleus | 41.88 | 34.33 |
| Zm00001d028537_P001 | Maize | endoplasmic reticulum, plasma membrane | 40.58 | 33.55 |
| KRH64726 | Soybean | nucleus | 35.86 | 32.16 |
| KRH53192 | Soybean | nucleus | 35.6 | 32.15 |
| KRH57359 | Soybean | cytosol | 23.82 | 31.82 |
| KRH04088 | Soybean | cytosol | 23.82 | 31.27 |
| KRH28045 | Soybean | mitochondrion | 23.3 | 31.23 |
| KRH05942 | Soybean | nucleus | 33.77 | 30.94 |
| KRH17425 | Soybean | nucleus | 33.51 | 30.92 |
| KRH77393 | Soybean | mitochondrion | 22.51 | 30.28 |
| KRH73867 | Soybean | cytosol | 11.52 | 29.14 |
| KRH55605 | Soybean | cytosol | 31.15 | 26.98 |
| KRH22216 | Soybean | cytosol, plastid | 30.37 | 26.42 |
| KRH27121 | Soybean | cytosol, plastid | 29.84 | 26.15 |
| KRH37293 | Soybean | plastid | 9.95 | 24.68 |
| KRH21644 | Soybean | nucleus | 25.65 | 24.56 |
| KRH14275 | Soybean | cytosol | 17.02 | 24.34 |
| KRH58632 | Soybean | nucleus | 22.25 | 23.48 |
| KRH10693 | Soybean | nucleus | 24.35 | 23.37 |
Protein Annotations
| EntrezGene:100785244 | MapMan:15.5.15 | Gene3D:3.90.228.10 | EMBL:ACUP02010875 | EnsemblPlantsGene:GLYMA_18G066100 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | UniProt:I1N022 |
| InterPro:IPR013087 | EnsemblPlants:KRG98330 | ProteinID:KRG98330 | ProteinID:KRG98330.1 | ScanProsite:PS00028 | PFscan:PS50157 |
| PANTHER:PTHR31681 | PANTHER:PTHR31681:SF24 | SUPFAM:SSF56399 | TMHMM:TMhelix | UniParc:UPI0001B37425 | InterPro:Znf_C2H2_type |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:6067644..6068792
Molecular Weight (calculated)
42167.3 Da
IEP (calculated)
8.499
GRAVY (calculated)
-0.234
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MASIATFFNK FLYFFILLVH LGCFIFTTAG KQSPPSKKRK TSPLSQPSSP SHTKFKTHKA LSSSWHFIKH LFSTKSCKTP NTATTQSSPQ STATTTTTTA
101: SAAAASSLIS LSQPDPDRNQ PVSCPESGIS TDTNLFFPLR NDIFPCTACG EIFQKPHLLE AHQTLKHAVS DLPGSDPGHN IVQIIFKSGW PESKPFPTIT
201: RILKIHNSPK ILSKFEEYRE AVKSKAARHG AHTRRRDERC IADGNELMRF HCSTFLCDLG HNGDSAICSQ QFCNICGIIK SGFSPKLDGI ATLSTSWRAH
301: VAIPEDIERE FRFMNVKRAM LVCRVIAGRV GSDSDEVEKE DGGFDSVMAS GESGVYTRLD EEELLVFNPR AVLPCFVIVY SV
101: SAAAASSLIS LSQPDPDRNQ PVSCPESGIS TDTNLFFPLR NDIFPCTACG EIFQKPHLLE AHQTLKHAVS DLPGSDPGHN IVQIIFKSGW PESKPFPTIT
201: RILKIHNSPK ILSKFEEYRE AVKSKAARHG AHTRRRDERC IADGNELMRF HCSTFLCDLG HNGDSAICSQ QFCNICGIIK SGFSPKLDGI ATLSTSWRAH
301: VAIPEDIERE FRFMNVKRAM LVCRVIAGRV GSDSDEVEKE DGGFDSVMAS GESGVYTRLD EEELLVFNPR AVLPCFVIVY SV
001: MAARKLGSLL RQYFFSLCFL FLGCFFFPKD ADYKQKRRKK KLRRVSSSSG SSLSSSWTYL KRVFLSTTRI SKSRNQTHPN VTLTSARSSQ NSLVTLVQPD
101: TTNQPDPETR IHQQTEFEIS SSDEIFPCNS CGEIFPKINL LENHIAIKHA VSELIAGESS TNIVKIIFKS GWPEQGNYKS PVINRILKIH NSSKILTRFE
201: EYREFVKAKA ARSNGGGRRW DDERCVADGN ELLRFYCSTF MCDLGQNGKS NLCGHQYCSI CGIIGSGFSP KLDGIATLAT GWRGHVAVPE EVEEEFGFMN
301: VKRAMLVCRV VAGRVGCDLI DDDDVDKSDG GGYDSLVGQS GNKSGALLRI DDDELLVFNP RAVLPCFVIV YTV
101: TTNQPDPETR IHQQTEFEIS SSDEIFPCNS CGEIFPKINL LENHIAIKHA VSELIAGESS TNIVKIIFKS GWPEQGNYKS PVINRILKIH NSSKILTRFE
201: EYREFVKAKA ARSNGGGRRW DDERCVADGN ELLRFYCSTF MCDLGQNGKS NLCGHQYCSI CGIIGSGFSP KLDGIATLAT GWRGHVAVPE EVEEEFGFMN
301: VKRAMLVCRV VAGRVGCDLI DDDDVDKSDG GGYDSLVGQS GNKSGALLRI DDDELLVFNP RAVLPCFVIV YTV
Arabidopsis Description
At2g29660 [Source:UniProtKB/TrEMBL;Acc:O82389]
SUBAcon: [plasma membrane,golgi]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.