CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
cytosol 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17425	Soybean	nucleus	93.29	93.96
VIT_18s0001g14130.t01	Wine grape	vacuole	75.06	74.7
PGSC0003DMT400025521	Potato	plastid	51.32	68.15
CDX73189	Canola	nucleus	67.87	65.97
CDY47503	Canola	nucleus	68.59	65.6
GSMUA_Achr11P...	Banana	nucleus	40.53	65.0
CDY13543	Canola	nucleus	66.67	64.35
Solyc04g081370.2.1	Tomato	extracellular, vacuole	69.06	63.86
AT1G75710.1	Thale cress	nucleus	70.26	63.42
CDY39052	Canola	nucleus	67.63	63.23
Bra008218.1-P	Field mustard	nucleus	67.39	63.0
Bra015824.1-P	Field mustard	nucleus	69.78	62.85
KRH25897	Soybean	cytosol	23.02	53.93
TraesCS2A01G004600.1	Wheat	nucleus	41.25	50.89
GSMUA_Achr8P19240_001	Banana	nucleus	48.44	47.87
GSMUA_Achr11P...	Banana	nucleus	50.84	46.19
KRH64726	Soybean	nucleus	46.76	45.77
KRH53192	Soybean	nucleus	46.28	45.63
Os04t0115500-00	Rice	nucleus	48.44	42.08
TraesCSU01G012300.1	Wheat	nucleus, plastid	47.96	41.24
Zm00001d004497_P001	Maize	nucleus, plastid	45.08	40.96
TraesCS2D01G004200.1	Wheat	nucleus, plastid	47.72	40.53
Zm00001d024883_P001	Maize	nucleus	46.76	38.09
EES10376	Sorghum	nucleus	48.2	37.08
KRH55605	Soybean	cytosol	38.85	36.73
KRH28045	Soybean	mitochondrion	24.7	36.14
KRH22216	Soybean	cytosol, plastid	37.65	35.76
KRH77393	Soybean	mitochondrion	24.22	35.56
KRH27121	Soybean	cytosol, plastid	36.93	35.32
KRG98330	Soybean	endoplasmic reticulum, golgi	30.94	33.77
KRH04088	Soybean	cytosol	23.5	33.68
KRH57359	Soybean	cytosol	23.02	33.57
KRH10693	Soybean	nucleus	30.22	31.66
KRH58632	Soybean	nucleus	27.34	31.49
KRH73867	Soybean	cytosol	11.27	31.13
KRH21644	Soybean	nucleus	29.5	30.83
KRH37293	Soybean	plastid	10.79	29.22
KRH14275	Soybean	cytosol	18.23	28.46

Protein Annotations

EMBL:ACUP02010784	EnsemblPlants:KRH05942	EnsemblPlantsGene:GLYMA_17G257700	EntrezGene:100816726	Gene3D:3.90.228.10	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_type	PANTHER:PTHR31681	PANTHER:PTHR31681:SF22
PFscan:PS50157	ProteinID:KRH05942	ProteinID:KRH05942.1	ScanProsite:PS00028	SEG:seg	SUPFAM:SSF56399
UniParc:UPI000233EACD	UniProt:I1MY28	MapMan:15.5.15	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:41179797..41183858

Molecular Weight (calculated)

45195.8 Da

IEP (calculated)

9.330

GRAVY (calculated)

-0.419

Length

417 amino acids

Sequence
(BLAST)

001: MALLTSLPEQ SSSTPKRHHK RKPQQQQQQQ KQKPASSWDQ IKNLLTCKQI EGSRVHDPSK VVSGYSKLGS SCSSICSFRD VVHGNTRVVH RSDNSSPESS
101: SLGQETNGLL TRKPVTTTTT TTTRSSAKSH GGATYTSSSS SRGMQFRKLS GCYECHMIID PSRLPIARST VCACSHCGEV FPKMESLELH QAVRHAVSEL
201: GPEDSGRNIV EIIFKSSWLK KDNPICKIER ILKVHNTQRT IQRFEECRDT VKNRALGSTK KNPRCAADGN ELLRFHCTTL TCALGARGSS SLCASVHGSC
301: GVCTIIRHGF QGGSCGGGSG DHGKAKGVRT TASSGRAHDS VVCGDATRRA MLVCRVIAGR VKRVVEDAPS EEEHVSVASY DSVAGYAGIY SNLEELVVFN
401: PKAILPCFVV IYKVPSC

Best Arabidopsis Sequence Match ( AT1G75710.1 )
(BLAST)

001: MALLTFLPEN AEAPQKHKPT SSKRKKRDNP TDQTQTQKHK PQKPKKAVPP KQPSSWDQIK NLLTCKQIEG SRVHDPSKNS QSGPSMTTNL SPSKLGSSCS
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES

Arabidopsis Description

C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9LR10]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.