Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d004497_P001 | Maize | nucleus, plastid | 72.66 | 81.05 |
| EES10376 | Sorghum | nucleus | 84.18 | 79.52 |
| Os04t0115500-00 | Rice | nucleus | 67.77 | 72.29 |
| TraesCS2A01G004600.1 | Wheat | nucleus | 47.66 | 72.19 |
| GSMUA_Achr11P... | Banana | nucleus | 33.2 | 65.38 |
| TraesCSU01G012300.1 | Wheat | nucleus, plastid | 61.33 | 64.74 |
| TraesCS2D01G004200.1 | Wheat | nucleus, plastid | 60.94 | 63.54 |
| GSMUA_Achr8P19240_001 | Banana | nucleus | 45.31 | 54.98 |
| GSMUA_Achr11P... | Banana | nucleus | 46.68 | 52.07 |
| PGSC0003DMT400025521 | Potato | plastid | 31.84 | 51.91 |
| CDX73189 | Canola | nucleus | 40.62 | 48.48 |
| CDY47503 | Canola | nucleus | 41.21 | 48.39 |
| KRH17425 | Soybean | nucleus | 38.67 | 47.83 |
| VIT_18s0001g14130.t01 | Wine grape | vacuole | 39.06 | 47.73 |
| KRH05942 | Soybean | nucleus | 38.09 | 46.76 |
| AT1G75710.1 | Thale cress | nucleus | 41.8 | 46.32 |
| CDY13543 | Canola | nucleus | 39.06 | 46.3 |
| Bra014094.1-P | Field mustard | plastid | 37.5 | 45.93 |
| Bra015824.1-P | Field mustard | nucleus | 41.41 | 45.79 |
| CDY39052 | Canola | nucleus | 39.65 | 45.52 |
| CDY20903 | Canola | nucleus, plastid | 37.11 | 45.35 |
| Bra008218.1-P | Field mustard | nucleus | 39.26 | 45.07 |
| Bra015598.1-P | Field mustard | plastid | 36.52 | 44.63 |
| CDY06723 | Canola | nucleus, plastid | 36.33 | 44.39 |
| Solyc04g081370.2.1 | Tomato | extracellular, vacuole | 39.06 | 44.35 |
| CDY16999 | Canola | nucleus, plastid | 33.4 | 41.3 |
| CDY17799 | Canola | nucleus, plastid | 34.96 | 41.24 |
| Zm00001d026684_P001 | Maize | nucleus | 32.62 | 39.86 |
| Zm00001d053006_P001 | Maize | nucleus | 28.12 | 33.96 |
| Zm00001d047106_P001 | Maize | plastid | 17.97 | 31.08 |
| Zm00001d017504_P001 | Maize | mitochondrion | 17.19 | 30.03 |
| Zm00001d029869_P001 | Maize | mitochondrion | 17.97 | 29.97 |
| Zm00001d004822_P001 | Maize | nucleus, plastid | 19.92 | 29.23 |
| Zm00001d012605_P001 | Maize | nucleus | 27.73 | 28.34 |
| Zm00001d043243_P001 | Maize | nucleus | 27.73 | 28.12 |
| PGSC0003DMT400076665 | Potato | cytosol | 8.59 | 27.67 |
| Zm00001d028537_P001 | Maize | endoplasmic reticulum, plasma membrane | 22.66 | 25.11 |
| Zm00001d014485_P001 | Maize | nucleus, plastid | 20.51 | 23.97 |
Protein Annotations
| EnsemblPlants:Zm00001d024883_P001 | EnsemblPlants:Zm00001d024883_T001 | EnsemblPlantsGene:Zm00001d024883 | EntrezGene:103641406 | Gene3D:3.90.228.10 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF20 |
| PFscan:PS50157 | ProteinID:AQK42251.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF56399 | UniParc:UPI0002216B4C |
| UniProt:K7TIW4 | MapMan:15.5.15 | : | : | : | : |
Description
C2H2-like zinc finger protein
Coordinates
chr10:-:92160789..92164199
Molecular Weight (calculated)
53442.6 Da
IEP (calculated)
9.251
GRAVY (calculated)
-0.389
Length
512 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLATLLLPS PGSMATKAGT AGDHHTDSRR HDHDHHGSKC KKKPPASPQP SSLASAPRTP PSGARSQRVM VMAASSSSPR KKSPKAPAAG KNSRAQYQQH
101: RGQATKKKAT AAASWDWEQV KSLLSCRSVT AAARVHDPAA PSALARLRGS GAGTCGASLC AMRDVVDAAS SAASSAAASA SASGDRDTAP LNRRRAHRGA
201: SSSSAGAGSS HHSSLRGLSG CYECRAINVE PMSRRYPRPR ELCACPQCGE VFTKADTLEH HQAIRHAVSE LGPEDSGRNI VEIIFKSSWH KRDRPICHID
301: RILKVHNAPR TVARFEAYRD AVRSRCRAVV AARAAADGNE LLRFHSAPLA CALGLGGATA LCCAAADADA DAPAPPCGVC TAIRHGFAPW LGAHPLGVRT
401: TASSGRAHDC ASDNNNPSPP PPHQTQSAAS DVSNAAACRA MLVCRVIAGR VRRDGDGDTS AAAGEDQEGP FDSVAGEDAA SSSVYGNLEE LFVANPRAIL
501: PCFVVIYRVL DS
101: RGQATKKKAT AAASWDWEQV KSLLSCRSVT AAARVHDPAA PSALARLRGS GAGTCGASLC AMRDVVDAAS SAASSAAASA SASGDRDTAP LNRRRAHRGA
201: SSSSAGAGSS HHSSLRGLSG CYECRAINVE PMSRRYPRPR ELCACPQCGE VFTKADTLEH HQAIRHAVSE LGPEDSGRNI VEIIFKSSWH KRDRPICHID
301: RILKVHNAPR TVARFEAYRD AVRSRCRAVV AARAAADGNE LLRFHSAPLA CALGLGGATA LCCAAADADA DAPAPPCGVC TAIRHGFAPW LGAHPLGVRT
401: TASSGRAHDC ASDNNNPSPP PPHQTQSAAS DVSNAAACRA MLVCRVIAGR VRRDGDGDTS AAAGEDQEGP FDSVAGEDAA SSSVYGNLEE LFVANPRAIL
501: PCFVVIYRVL DS
001: MALLTFLPEN AEAPQKHKPT SSKRKKRDNP TDQTQTQKHK PQKPKKAVPP KQPSSWDQIK NLLTCKQIEG SRVHDPSKNS QSGPSMTTNL SPSKLGSSCS
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES
Arabidopsis Description
C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9LR10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.