Factsheet for Zm00001d043243_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03733	Sorghum	nucleus	91.49	88.34
Zm00001d012605_P001	Maize	nucleus	86.14	86.83
Os01t0785900-01	Rice	mitochondrion, nucleus, peroxisome, plastid	79.21	82.47
TraesCS3D01G317900.1	Wheat	nucleus	77.82	81.7
TraesCS3B01G353600.1	Wheat	nucleus	77.62	80.66
HORVU3Hr1G077490.2	Barley	nucleus	77.43	80.62
TraesCS3A01G324600.1	Wheat	nucleus	76.83	76.53
KRH25897	Soybean	cytosol	26.93	76.4
VIT_19s0014g05000.t01	Wine grape	cytosol, plastid	60.0	70.63
GSMUA_Achr6P19070_001	Banana	cytosol	18.22	69.7
GSMUA_Achr6P24320_001	Banana	cytosol	46.34	69.44
VIT_00s1356g00010.t01	Wine grape	cytosol	52.87	69.17
GSMUA_Achr1P08590_001	Banana	nucleus	56.04	67.87
KRH55605	Soybean	cytosol	58.42	66.89
KRH22216	Soybean	cytosol, plastid	58.02	66.74
KRH27121	Soybean	cytosol, plastid	57.43	66.51
PGSC0003DMT400049491	Potato	cytosol, nucleus, peroxisome	56.63	66.51
GSMUA_Achr9P24720_001	Banana	cytosol	47.52	66.48
Solyc07g063970.2.1	Tomato	cytosol, nucleus, peroxisome	56.04	66.28
GSMUA_Achr9P29950_001	Banana	cytosol	48.71	65.6
GSMUA_AchrUn_...	Banana	cytosol	46.34	65.0
PGSC0003DMT400055929	Potato	cytosol	53.47	64.75
Solyc02g079920.2.1	Tomato	cytosol	53.47	64.13
CDY29286	Canola	nucleus	51.09	62.77
CDY06635	Canola	nucleus	53.27	61.14
CDY28761	Canola	nucleus	54.06	61.07
Bra026366.1-P	Field mustard	nucleus	50.89	60.33
CDX89265	Canola	nucleus	50.89	60.19
AT4G27240.1	Thale cress	nucleus	50.49	59.16
Bra022735.1-P	Field mustard	nucleus	54.85	58.56
AT5G54630.1	Thale cress	nucleus	54.46	58.26
CDY18344	Canola	nucleus	50.89	56.73
GSMUA_Achr6P19060_001	Banana	nucleus	23.56	52.65
AT1G11490.2	Thale cress	mitochondrion	31.49	43.56
Zm00001d014485_P001	Maize	nucleus, plastid	37.43	43.15
Bra019849.1-P	Field mustard	cytosol, mitochondrion	29.31	41.34
CDX97964	Canola	cytosol	29.31	41.23
CDY49785	Canola	cytosol	29.11	41.06
KRH10693	Soybean	nucleus	30.89	39.2
KRH21644	Soybean	nucleus	29.9	37.84
KRH58632	Soybean	nucleus	26.34	36.74
Zm00001d026684_P001	Maize	nucleus	29.11	35.08
Zm00001d029869_P001	Maize	mitochondrion	18.22	29.97
Zm00001d053006_P001	Maize	nucleus	25.15	29.95
Zm00001d004497_P001	Maize	nucleus, plastid	26.73	29.41
Zm00001d047106_P001	Maize	plastid	17.23	29.39
Zm00001d017504_P001	Maize	mitochondrion	17.03	29.35
Zm00001d024883_P001	Maize	nucleus	28.12	27.73
Zm00001d004822_P001	Maize	nucleus, plastid	19.01	27.51
Zm00001d028537_P001	Maize	endoplasmic reticulum, plasma membrane	21.98	24.03

Protein Annotations

EntrezGene:100285506	MapMan:15.5.15	Gene3D:3.90.228.10	UniProt:B6U5R9	EMBL:EU972584	EMBL:FM252126
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	InterPro:IPR006311	InterPro:IPR013087	ProteinID:ONM37273.1
ScanProsite:PS00028	PFscan:PS50157	PFscan:PS51318	PANTHER:PTHR31681	PANTHER:PTHR31681:SF19	SUPFAM:SSF56399
InterPro:TAT_signal	UniParc:UPI000182FAF2	EnsemblPlantsGene:Zm00001d043243	EnsemblPlants:Zm00001d043243_P001	EnsemblPlants:Zm00001d043243_T001	InterPro:Znf_C2H2_type
SEG:seg	:	:	:	:	:

Description

MRP interacting2 MRP interacting2

Coordinates

chr3:+:192962985..192965166

Molecular Weight (calculated)

52170.3 Da

IEP (calculated)

9.922

GRAVY (calculated)

-0.207

Length

505 amino acids

Sequence
(BLAST)

001: MSERRRRASA ASLGGGGGGG VGGVAPARAE EDKVAAPGKA PPPTVWFAFK RSLHCRSEPS EVHVPRAKAG PVAGGGAGAA VGGGHLSSIV TKRAARSGCS
101: RSIANLRDVI HGSKRHPGQP PSCSPRSIGS SEFLNPIAHE VVLSTNSRCE LKITGFGGCG GLAAVGVGTG AANDADGGGD GGVVSSFVGT LRPGTPGPAW
201: AGHGLPYSGS VRGSVRCTPP RSPNVMLERN GSVVNGHRAS CDETAKNGAS KGSGGLSCHK CGEQFSKWEA LEAHHLSKHA VTELVEGDSS RKIVEIICRT
301: SLLKSESSCV RIERVFKVHN TQRTLSRFEE YREAVKLKAS KLAKKHPRCL ADGNELLRFH GATLSCALGG GSGSSSLCAS DKCAVCRIIR HGFSARKEGK
401: GGVGVFTTST SGRAFESIVE APPAIGVGDD DGAGQLGLGT ARRALLVCRV IAGRVHKPLD NLKEFVGQTG FDSLAGKVGP YSNIEELYLL NPRALLPCFV
501: VICRP

Best Arabidopsis Sequence Match ( AT5G54630.1 )
(BLAST)

001: MEDSSKKSQK KKKNKSKNNI PTVWFSLKKS LHCKSEPSDV HDPISTTKQQ QHLSTISTKK ISGISSGGAA VCGGGLSGCS RSIANLKDVI HGSKRHFEKP
101: PISSPRSIGS NEFLNPITHE VILSNSTCEL KITGVGDMAS PVGAADSGGG GGGGNGRSTT YVGMLRPGTP MHYLNHSASY RSQTRKGSFA LSERDRGGGG
201: GGEGLGFHTN RRVSLEMNRE STINGGNNSS VSCHKCGEQF NKLEAAEAHH LSKHAVTELV EGDSSRKIVE IICRTSWLKS ENQCGRIDRV LKVHNMQKTL
301: ARFEEYRETV KIRASKLQKK HPRCLADGNE LLRFHGTTVA CGLGINGSTS VCTAEKCCVC RIIRNGFSSK REKNNGVGVF TASTSGRAFE SILVNGGDES
401: GDVDRTVRKV LIVCRVIAGR VHRPVENVEE MNGLMSGFDS LAGKVGLYTN VEELYLLNPK ALLPCFVVIC KP

Arabidopsis Description

AT5g54630/MRB17_13 [Source:UniProtKB/TrEMBL;Acc:Q9FIU1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.