Factsheet for GSMUA_Achr1P08590_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	68.82	79.72
GSMUA_Achr6P24320_001	Banana	cytosol	62.83	77.74
GSMUA_Achr6P19070_001	Banana	cytosol	23.02	72.73
GSMUA_Achr9P24720_001	Banana	cytosol	59.47	68.7
GSMUA_Achr9P29950_001	Banana	cytosol	60.91	67.73
Os01t0785900-01	Rice	mitochondrion, nucleus, peroxisome, plastid	67.63	58.14
TraesCS3D01G317900.1	Wheat	nucleus	65.95	57.17
GSMUA_Achr6P19060_001	Banana	nucleus	30.7	56.64
TraesCS3B01G353600.1	Wheat	nucleus	65.71	56.38
Zm00001d043243_P001	Maize	nucleus	67.87	56.04
HORVU3Hr1G077490.2	Barley	nucleus	64.99	55.88
Zm00001d012605_P001	Maize	nucleus	65.47	54.49
TraesCS3A01G324600.1	Wheat	nucleus	65.71	54.04
EES03733	Sorghum	nucleus	67.15	53.54
Os06t0683000-01	Rice	cytosol, nucleus, plastid	53.48	47.96
GSMUA_Achr11P...	Banana	cytosol	29.74	45.93
GSMUA_Achr6P17990_001	Banana	nucleus	27.82	45.14
GSMUA_Achr11P...	Banana	nucleus	27.1	43.46
Zm00001d014485_P001	Maize	nucleus, plastid	45.08	42.92
EER88828	Sorghum	cytosol	44.36	42.82
GSMUA_Achr9P00350_001	Banana	nucleus	28.78	42.11
GSMUA_Achr2P08150_001	Banana	nucleus, plastid	31.65	39.88
GSMUA_Achr7P19590_001	Banana	cytosol	7.43	36.05
GSMUA_Achr8P30300_001	Banana	nucleus	33.33	36.01
GSMUA_Achr5P01120_001	Banana	nucleus, plastid	32.37	35.06
GSMUA_Achr8P19240_001	Banana	nucleus	33.57	33.18
GSMUA_Achr2P10020_001	Banana	cytosol	20.14	31.34
GSMUA_Achr4P30380_001	Banana	cytosol	20.86	30.74
GSMUA_Achr11P...	Banana	nucleus	33.57	30.5
GSMUA_Achr5P15290_001	Banana	nucleus	18.47	30.32
GSMUA_Achr1P01700_001	Banana	nucleus	21.34	30.17
GSMUA_Achr4P27010_001	Banana	plastid	20.38	29.72
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	26.14	29.38
GSMUA_Achr7P07110_001	Banana	cytosol	19.18	28.99
GSMUA_Achr5P13520_001	Banana	cytosol, mitochondrion, peroxisome	19.66	27.8

Protein Annotations

EnsemblPlants:GSMUA_Achr1P08590_001	EnsemblPlants:GSMUA_Achr1T08590_001	EnsemblPlantsGene:GSMUA_Achr1G08590_001	Gene3D:3.90.228.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_type	PANTHER:PTHR31681	PANTHER:PTHR31681:SF19	PFscan:PS50157
ScanProsite:PS00028	SUPFAM:SSF56399	UniParc:UPI000296579F	UniProt:M0RY67	MapMan:15.5.15	:

Description

ZOS1-12 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G08590_001]

Coordinates

chr1:+:6564895..6566987

Molecular Weight (calculated)

45999.2 Da

IEP (calculated)

9.523

GRAVY (calculated)

-0.527

Length

417 amino acids

Sequence
(BLAST)

001: MLPHQPWGFQ DRKGSRDMTE RSCGAPKQKK ESRAEERMPT VWFALKKSLH CKTEPSDVHD PKARGHLGAI LTRRPGRSGC SRSIANLKDV IHGSKRHLER
101: PPSCSPRSIG SSEFLNPITH EVILSNSRCE LRITGFGGCP DANNTPPRKP PTLLGGRDGH GIVGSSLSTD SQTKRHSAAV TCHKCGEQFG KQEALESHHL
201: SKHAVTELVE GDSSRKIVEI ICRASWLKPE SSCIRIERVL KVHNMQKTLS RFEEYRELVK NKASKLAKKH PRCLADGNEL LRFHGTTMAC SLGTNGSSSL
301: CSSEKCNVCR IIRHGFSAKK EVKGGIGVFT TSTSGRAFET IETYDDDDGD PSIKKALLVC RVIAGRVHKP LDNYQELAGH SGFDSMAGKV GLYANIEELY
401: LLNPRALLPC FVVICRT

Best Arabidopsis Sequence Match ( AT5G54630.1 )
(BLAST)

001: MEDSSKKSQK KKKNKSKNNI PTVWFSLKKS LHCKSEPSDV HDPISTTKQQ QHLSTISTKK ISGISSGGAA VCGGGLSGCS RSIANLKDVI HGSKRHFEKP
101: PISSPRSIGS NEFLNPITHE VILSNSTCEL KITGVGDMAS PVGAADSGGG GGGGNGRSTT YVGMLRPGTP MHYLNHSASY RSQTRKGSFA LSERDRGGGG
201: GGEGLGFHTN RRVSLEMNRE STINGGNNSS VSCHKCGEQF NKLEAAEAHH LSKHAVTELV EGDSSRKIVE IICRTSWLKS ENQCGRIDRV LKVHNMQKTL
301: ARFEEYRETV KIRASKLQKK HPRCLADGNE LLRFHGTTVA CGLGINGSTS VCTAEKCCVC RIIRNGFSSK REKNNGVGVF TASTSGRAFE SILVNGGDES
401: GDVDRTVRKV LIVCRVIAGR VHRPVENVEE MNGLMSGFDS LAGKVGLYTN VEELYLLNPK ALLPCFVVIC KP

Arabidopsis Description

AT5g54630/MRB17_13 [Source:UniProtKB/TrEMBL;Acc:Q9FIU1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.