Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P24320_001 | Banana | cytosol | 68.89 | 73.59 |
| GSMUA_Achr6P19070_001 | Banana | cytosol | 25.56 | 69.7 |
| GSMUA_Achr1P08590_001 | Banana | nucleus | 79.72 | 68.82 |
| GSMUA_Achr9P24720_001 | Banana | cytosol | 64.44 | 64.27 |
| GSMUA_Achr9P29950_001 | Banana | cytosol | 61.39 | 58.93 |
| GSMUA_Achr6P19060_001 | Banana | nucleus | 31.94 | 50.88 |
| Os01t0785900-01 | Rice | mitochondrion, nucleus, peroxisome, plastid | 66.11 | 49.07 |
| TraesCS3D01G317900.1 | Wheat | nucleus | 64.72 | 48.44 |
| TraesCS3B01G353600.1 | Wheat | nucleus | 64.44 | 47.74 |
| HORVU3Hr1G077490.2 | Barley | nucleus | 63.89 | 47.42 |
| Zm00001d043243_P001 | Maize | nucleus | 65.0 | 46.34 |
| TraesCS3A01G324600.1 | Wheat | nucleus | 64.44 | 45.76 |
| Zm00001d012605_P001 | Maize | nucleus | 63.33 | 45.51 |
| EES03733 | Sorghum | nucleus | 65.0 | 44.74 |
| Os06t0683000-01 | Rice | cytosol, nucleus, plastid | 55.56 | 43.01 |
| GSMUA_Achr6P17990_001 | Banana | nucleus | 28.33 | 39.69 |
| GSMUA_Achr11P... | Banana | cytosol | 29.44 | 39.26 |
| EER88828 | Sorghum | cytosol | 46.11 | 38.43 |
| Zm00001d014485_P001 | Maize | nucleus, plastid | 46.39 | 38.13 |
| GSMUA_Achr11P... | Banana | nucleus | 27.22 | 37.69 |
| GSMUA_Achr7P19590_001 | Banana | cytosol | 8.89 | 37.21 |
| GSMUA_Achr9P00350_001 | Banana | nucleus | 28.89 | 36.49 |
| GSMUA_Achr2P08150_001 | Banana | nucleus, plastid | 32.22 | 35.05 |
| GSMUA_Achr8P30300_001 | Banana | nucleus | 34.17 | 31.87 |
| GSMUA_Achr4P30380_001 | Banana | cytosol | 23.89 | 30.39 |
| GSMUA_Achr5P01120_001 | Banana | nucleus, plastid | 32.22 | 30.13 |
| GSMUA_Achr2P10020_001 | Banana | cytosol | 22.22 | 29.85 |
| GSMUA_Achr1P01700_001 | Banana | nucleus | 24.44 | 29.83 |
| GSMUA_Achr8P19240_001 | Banana | nucleus | 34.44 | 29.38 |
| GSMUA_Achr4P27010_001 | Banana | plastid | 23.33 | 29.37 |
| GSMUA_Achr5P15290_001 | Banana | nucleus | 20.56 | 29.13 |
| GSMUA_Achr7P07110_001 | Banana | cytosol | 21.39 | 27.9 |
| GSMUA_Achr5P13520_001 | Banana | cytosol, mitochondrion, peroxisome | 22.78 | 27.8 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 27.78 | 26.95 |
| GSMUA_Achr11P... | Banana | nucleus | 34.17 | 26.8 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP09610_001 | EnsemblPlants:GSMUA_AchrUn_randomT09610_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG09610_001 | Gene3D:3.90.228.10 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF19 | ScanProsite:PS00028 |
| SUPFAM:SSF56399 | UniParc:UPI000296E4DC | UniProt:M0U7S1 | MapMan:15.5.15 | : | : |
Description
Putative ZOS6-07 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG09610_001]
Coordinates
chrchrUn_random:-:45074740..45076686
Molecular Weight (calculated)
40221.4 Da
IEP (calculated)
10.082
GRAVY (calculated)
-0.462
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVEKTPTVW FALKKSLHCK SEPSDVYDPK TRGRMGTILT RKAGRSGCSR SIANLKDVIH GSKRHLERPP SCSPRSIGSN EFLNPITHEV ILSNSRRALC
101: PPQHSFTQGS QHHTSKEISY PLRVGFHHAA STPRFSHEAD SQTKRPSAAV TCHKCGEHFG KLEALESHHL SKHAVTELVE GDSSRKIVEI ICRASWLKPE
201: SSCIRIDRVL KVHNMQKTLA RFEEYRELVK NKANRLAKKH PRCLADGNEL LRVCRIIRHG FSTKREIAKG GIGVFTSSTS GRAFQTIEPC EDDNSTKKAL
301: LVCRVIAGRV HKPLDNYQEL AGQSGFDSVA GKLGLYANIE ELYLFNPRAL LPCFVVICRT
101: PPQHSFTQGS QHHTSKEISY PLRVGFHHAA STPRFSHEAD SQTKRPSAAV TCHKCGEHFG KLEALESHHL SKHAVTELVE GDSSRKIVEI ICRASWLKPE
201: SSCIRIDRVL KVHNMQKTLA RFEEYRELVK NKANRLAKKH PRCLADGNEL LRVCRIIRHG FSTKREIAKG GIGVFTSSTS GRAFQTIEPC EDDNSTKKAL
301: LVCRVIAGRV HKPLDNYQEL AGQSGFDSVA GKLGLYANIE ELYLFNPRAL LPCFVVICRT
001: MEASSTRSEK KKKKKTIQRE NTDTQKKKKL PSVWFSLKKS LPCKSDVSDV HIPRSKKELA PISTKRTTTS SGGGVGGRSG CSRSIANLKD VIHGNQRHLE
101: KPLCSSPRSI GSSEFLNPIT HDVIFSNSTC ELKITAAGAT EFVGNLRPGT PVNYSSSRRS QTSRKASSLD REGLGFHQSR RENDREAAIN GDNSSVSCHK
201: CGEKFSKLEA AEAHHLTKHA VTELMEGDSS RRIVEIICRT SWLKTENQGG RIDRILKVHN MQKTLARFEE YRDTVKIRAS KLQKKHPRCI ADGNELLRFH
301: GTTVACALGI NGSTSLCSSE KCCVCRIIRN GFSAKREMNN GIGVFTASTS ERAFESIVIG DGGGGDRKAL IVCRVIAGRV HRPVENVEEM GGLLSGFDSL
401: AGKVGLYTNV EELYLLNSRA LLPCFVLICK P
101: KPLCSSPRSI GSSEFLNPIT HDVIFSNSTC ELKITAAGAT EFVGNLRPGT PVNYSSSRRS QTSRKASSLD REGLGFHQSR RENDREAAIN GDNSSVSCHK
201: CGEKFSKLEA AEAHHLTKHA VTELMEGDSS RRIVEIICRT SWLKTENQGG RIDRILKVHN MQKTLARFEE YRDTVKIRAS KLQKKHPRCI ADGNELLRFH
301: GTTVACALGI NGSTSLCSSE KCCVCRIIRN GFSAKREMNN GIGVFTASTS ERAFESIVIG DGGGGDRKAL IVCRVIAGRV HRPVENVEEM GGLLSGFDSL
401: AGKVGLYTNV EELYLLNSRA LLPCFVLICK P
Arabidopsis Description
At4g27240 [Source:UniProtKB/TrEMBL;Acc:O81827]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.