Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P24320_001 | Banana | cytosol | 69.25 | 74.18 |
| GSMUA_Achr6P19070_001 | Banana | cytosol | 26.59 | 72.73 |
| GSMUA_AchrUn_... | Banana | cytosol | 64.27 | 64.44 |
| GSMUA_Achr1P08590_001 | Banana | nucleus | 68.7 | 59.47 |
| GSMUA_Achr9P29950_001 | Banana | cytosol | 59.83 | 57.6 |
| Os01t0785900-01 | Rice | mitochondrion, nucleus, peroxisome, plastid | 67.59 | 50.31 |
| HORVU3Hr1G077490.2 | Barley | nucleus | 66.76 | 49.69 |
| TraesCS3D01G317900.1 | Wheat | nucleus | 66.2 | 49.69 |
| TraesCS3B01G353600.1 | Wheat | nucleus | 65.65 | 48.77 |
| GSMUA_Achr6P19060_001 | Banana | nucleus | 30.19 | 48.23 |
| Zm00001d043243_P001 | Maize | nucleus | 66.48 | 47.52 |
| Zm00001d012605_P001 | Maize | nucleus | 65.37 | 47.11 |
| TraesCS3A01G324600.1 | Wheat | nucleus | 65.65 | 46.75 |
| EES03733 | Sorghum | nucleus | 67.04 | 46.27 |
| Os06t0683000-01 | Rice | cytosol, nucleus, plastid | 51.52 | 40.0 |
| EER88828 | Sorghum | cytosol | 45.43 | 37.96 |
| GSMUA_Achr11P... | Banana | cytosol | 27.7 | 37.04 |
| GSMUA_Achr6P17990_001 | Banana | nucleus | 26.32 | 36.97 |
| Zm00001d014485_P001 | Maize | nucleus, plastid | 44.6 | 36.76 |
| AT1G11490.2 | Thale cress | mitochondrion | 36.84 | 36.44 |
| GSMUA_Achr11P... | Banana | nucleus | 26.04 | 36.15 |
| GSMUA_Achr9P00350_001 | Banana | nucleus | 28.53 | 36.14 |
| Bra019849.1-P | Field mustard | cytosol, mitochondrion | 35.73 | 36.03 |
| CDX97964 | Canola | cytosol | 35.18 | 35.38 |
| CDY49785 | Canola | cytosol | 34.63 | 34.92 |
| KRH10693 | Soybean | nucleus | 38.23 | 34.67 |
| GSMUA_Achr7P19590_001 | Banana | cytosol | 8.03 | 33.72 |
| GSMUA_Achr2P08150_001 | Banana | nucleus, plastid | 30.47 | 33.23 |
| KRH21644 | Soybean | nucleus | 36.57 | 33.08 |
| KRH58632 | Soybean | nucleus | 30.47 | 30.39 |
| GSMUA_Achr8P30300_001 | Banana | nucleus | 32.41 | 30.31 |
| GSMUA_Achr5P01120_001 | Banana | nucleus, plastid | 31.58 | 29.61 |
| GSMUA_Achr8P19240_001 | Banana | nucleus | 33.8 | 28.91 |
| GSMUA_Achr2P10020_001 | Banana | cytosol | 20.78 | 27.99 |
| GSMUA_Achr4P30380_001 | Banana | cytosol | 21.33 | 27.21 |
| GSMUA_Achr5P15290_001 | Banana | nucleus | 19.11 | 27.17 |
| GSMUA_Achr1P01700_001 | Banana | nucleus | 22.16 | 27.12 |
| GSMUA_Achr4P27010_001 | Banana | plastid | 21.05 | 26.57 |
| GSMUA_Achr7P07110_001 | Banana | cytosol | 20.22 | 26.45 |
| GSMUA_Achr11P... | Banana | nucleus | 33.52 | 26.36 |
| GSMUA_Achr5P13520_001 | Banana | cytosol, mitochondrion, peroxisome | 20.78 | 25.42 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 26.04 | 25.34 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P24720_001 | EnsemblPlants:GSMUA_Achr9T24720_001 | EnsemblPlantsGene:GSMUA_Achr9G24720_001 | Gene3D:3.90.228.10 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF19 | ScanProsite:PS00028 |
| SUPFAM:SSF56399 | UniParc:UPI00029640CF | UniProt:M0U379 | MapMan:15.5.15 | : | : |
Description
ZOS1-12 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G24720_001]
Coordinates
chr9:-:29416708..29418085
Molecular Weight (calculated)
40083.4 Da
IEP (calculated)
9.307
GRAVY (calculated)
-0.386
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTFWFALKR SLHCNSEPSE VHDPKARGHL ETILTRTAGR SGCSRSMANL KDVIHGSKRH LPKPPSCSPR STGSSKLLNP ITHEVVLSNP SCELRRITGS
101: GACHDSTYVG TVWSGTPWPG VHHPLQHNPS CTPRRSPRFS HETDVQVSSA AVPCHKCGKM FVKWQILEAH HLSKHAVSEL AEGDTSRKIV EMICRTSWLN
201: TGSSCRQIER VLKIHNMQRN LAQFEEYRET IKLKASKLPK KHPRCLADGN EHLSVCQIIR HGFSSKKESK GRIGVFTTST CGRALESIET CEDDPSVKKA
301: LLVCRVIAGR VHKPLDTYQE LVGRSAFDSM AGKIGIYGSI EELYLLDPSA LLPCFVVICK P
101: GACHDSTYVG TVWSGTPWPG VHHPLQHNPS CTPRRSPRFS HETDVQVSSA AVPCHKCGKM FVKWQILEAH HLSKHAVSEL AEGDTSRKIV EMICRTSWLN
201: TGSSCRQIER VLKIHNMQRN LAQFEEYRET IKLKASKLPK KHPRCLADGN EHLSVCQIIR HGFSSKKESK GRIGVFTTST CGRALESIET CEDDPSVKKA
301: LLVCRVIAGR VHKPLDTYQE LVGRSAFDSM AGKIGIYGSI EELYLLDPSA LLPCFVVICK P
001: MEDSSKKSQK KKKNKSKNNI PTVWFSLKKS LHCKSEPSDV HDPISTTKQQ QHLSTISTKK ISGISSGGAA VCGGGLSGCS RSIANLKDVI HGSKRHFEKP
101: PISSPRSIGS NEFLNPITHE VILSNSTCEL KITGVGDMAS PVGAADSGGG GGGGNGRSTT YVGMLRPGTP MHYLNHSASY RSQTRKGSFA LSERDRGGGG
201: GGEGLGFHTN RRVSLEMNRE STINGGNNSS VSCHKCGEQF NKLEAAEAHH LSKHAVTELV EGDSSRKIVE IICRTSWLKS ENQCGRIDRV LKVHNMQKTL
301: ARFEEYRETV KIRASKLQKK HPRCLADGNE LLRFHGTTVA CGLGINGSTS VCTAEKCCVC RIIRNGFSSK REKNNGVGVF TASTSGRAFE SILVNGGDES
401: GDVDRTVRKV LIVCRVIAGR VHRPVENVEE MNGLMSGFDS LAGKVGLYTN VEELYLLNPK ALLPCFVVIC KP
101: PISSPRSIGS NEFLNPITHE VILSNSTCEL KITGVGDMAS PVGAADSGGG GGGGNGRSTT YVGMLRPGTP MHYLNHSASY RSQTRKGSFA LSERDRGGGG
201: GGEGLGFHTN RRVSLEMNRE STINGGNNSS VSCHKCGEQF NKLEAAEAHH LSKHAVTELV EGDSSRKIVE IICRTSWLKS ENQCGRIDRV LKVHNMQKTL
301: ARFEEYRETV KIRASKLQKK HPRCLADGNE LLRFHGTTVA CGLGINGSTS VCTAEKCCVC RIIRNGFSSK REKNNGVGVF TASTSGRAFE SILVNGGDES
401: GDVDRTVRKV LIVCRVIAGR VHRPVENVEE MNGLMSGFDS LAGKVGLYTN VEELYLLNPK ALLPCFVVIC KP
Arabidopsis Description
AT5g54630/MRB17_13 [Source:UniProtKB/TrEMBL;Acc:Q9FIU1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.