Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P15290_001 | Banana | nucleus | 58.7 | 63.78 |
| GSMUA_Achr4P27010_001 | Banana | plastid | 64.49 | 62.24 |
| GSMUA_Achr2P10020_001 | Banana | cytosol | 59.06 | 60.82 |
| GSMUA_Achr1P01700_001 | Banana | nucleus | 63.77 | 59.66 |
| Os10t0554001-01 | Rice | cytosol | 38.77 | 58.79 |
| GSMUA_Achr5P13520_001 | Banana | cytosol, mitochondrion, peroxisome | 61.59 | 57.63 |
| GSMUA_Achr4P30380_001 | Banana | cytosol | 58.33 | 56.89 |
| TraesCS5A01G536800.1 | Wheat | cytosol | 36.96 | 53.12 |
| Solyc08g079010.1.1 | Tomato | cytosol | 28.99 | 50.63 |
| TraesCS6D01G230200.1 | Wheat | plastid | 48.19 | 47.5 |
| TraesCS6A01G248100.1 | Wheat | plastid | 47.46 | 47.29 |
| TraesCS6B01G276600.1 | Wheat | plastid | 47.46 | 46.79 |
| HORVU6Hr1G063400.2 | Barley | plastid | 47.46 | 46.62 |
| Zm00001d017504_P001 | Maize | mitochondrion | 48.55 | 45.73 |
| VIT_02s0154g00220.t01 | Wine grape | cytosol | 47.1 | 45.45 |
| KRH28045 | Soybean | mitochondrion | 46.74 | 45.26 |
| CDY42181 | Canola | cytosol | 42.03 | 44.96 |
| KRH77393 | Soybean | mitochondrion | 46.01 | 44.72 |
| Zm00001d047106_P001 | Maize | plastid | 47.83 | 44.59 |
| CDX76365 | Canola | cytosol | 41.67 | 44.57 |
| Bra020842.1-P | Field mustard | cytosol | 41.67 | 44.57 |
| HORVU1Hr1G053950.1 | Barley | mitochondrion, plastid | 47.46 | 44.56 |
| TraesCS1A01G210700.1 | Wheat | mitochondrion, plastid | 47.1 | 44.37 |
| TraesCS1D01G214000.1 | Wheat | mitochondrion, plastid | 46.38 | 44.29 |
| TraesCS1B01G224700.1 | Wheat | mitochondrion, plastid | 46.38 | 43.69 |
| AT4G12450.1 | Thale cress | cytosol | 43.48 | 43.32 |
| AT4G22560.1 | Thale cress | cytosol, plastid | 41.3 | 43.18 |
| Os02t0661600-00 | Rice | mitochondrion | 47.83 | 43.14 |
| Bra029455.1-P | Field mustard | cytosol | 43.12 | 42.81 |
| CDY16714 | Canola | cytosol | 43.12 | 42.81 |
| CDY63658 | Canola | cytosol | 43.12 | 42.81 |
| Zm00001d029869_P001 | Maize | mitochondrion | 47.46 | 42.67 |
| AT1G62520.1 | Thale cress | nucleus | 43.12 | 42.5 |
| Bra027038.1-P | Field mustard | cytosol, plastid | 40.58 | 42.42 |
| CDY12954 | Canola | nucleus | 40.58 | 42.42 |
| CDY19564 | Canola | nucleus | 40.58 | 42.42 |
| KXG31078 | Sorghum | plastid | 48.55 | 42.41 |
| KXG38947 | Sorghum | mitochondrion | 48.91 | 42.19 |
| KRH04088 | Soybean | cytosol | 43.84 | 41.58 |
| KRH57359 | Soybean | cytosol | 42.39 | 40.91 |
| PGSC0003DMT400012224 | Potato | nucleus | 43.12 | 39.8 |
| TraesCS4D01G361200.1 | Wheat | plastid | 42.39 | 37.99 |
| TraesCS4B01G369900.1 | Wheat | plastid | 41.3 | 36.42 |
| GSMUA_Achr6P19070_001 | Banana | cytosol | 15.22 | 31.82 |
| GSMUA_Achr11P... | Banana | nucleus | 29.35 | 31.15 |
| GSMUA_Achr6P17990_001 | Banana | nucleus | 25.72 | 27.63 |
| KRH37293 | Soybean | plastid | 15.22 | 27.27 |
| GSMUA_Achr11P... | Banana | cytosol | 25.0 | 25.56 |
| GSMUA_Achr9P00350_001 | Banana | nucleus | 25.36 | 24.56 |
| GSMUA_Achr7P19590_001 | Banana | cytosol | 7.61 | 24.42 |
| GSMUA_Achr8P19240_001 | Banana | nucleus | 36.59 | 23.93 |
| GSMUA_Achr6P24320_001 | Banana | cytosol | 27.17 | 22.26 |
| GSMUA_Achr11P... | Banana | nucleus | 36.59 | 22.0 |
| GSMUA_Achr2P08150_001 | Banana | nucleus, plastid | 26.09 | 21.75 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 28.99 | 21.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 27.9 | 21.39 |
| GSMUA_Achr9P29950_001 | Banana | cytosol | 28.99 | 21.33 |
| GSMUA_Achr5P01120_001 | Banana | nucleus, plastid | 29.35 | 21.04 |
| GSMUA_Achr9P24720_001 | Banana | cytosol | 26.45 | 20.22 |
| GSMUA_Achr8P30300_001 | Banana | nucleus | 27.54 | 19.69 |
| GSMUA_Achr1P08590_001 | Banana | nucleus | 28.99 | 19.18 |
| GSMUA_Achr6P19060_001 | Banana | nucleus | 10.51 | 12.83 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P07110_001 | EnsemblPlants:GSMUA_Achr7T07110_001 | EnsemblPlantsGene:GSMUA_Achr7G07110_001 | Gene3D:3.90.228.10 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF12 |
| SEG:seg | SUPFAM:SSF56399 | UniParc:UPI000296D086 | UniProt:M0TFF1 | MapMan:15.5.15 | : |
Description
zinc finger protein, putative [Source:GMGC_GENE;Acc:GSMUA_Achr7G07110_001]
Coordinates
chr7:+:5209247..5210077
Molecular Weight (calculated)
29090.5 Da
IEP (calculated)
8.783
GRAVY (calculated)
-0.216
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSGWMKSFR CRSNDVDDVV CPPLAPSSSS AKKWLLLPSL LLSCADSSSH APNDVLPKRP SAASSRTPKP EPRSRPQVSA PPPSPATAVA PSGPFPSLVE
101: LPPGHPSRRV VEIIFGSRWC SGEGRAAGAD AFSGTIEMLF RVRNPARSVA RFEEYRAAVR SRAARSDDAR CAADGNEMMR FQCRPPASAG EVFDGGVAWS
201: PAEGIRTFAG SGGAHESGGG GGAGRRAMLV CRVIAGRVRA ESDPESAADS VSLGEGELLV FDPRAVLPCF LIIYKL
101: LPPGHPSRRV VEIIFGSRWC SGEGRAAGAD AFSGTIEMLF RVRNPARSVA RFEEYRAAVR SRAARSDDAR CAADGNEMMR FQCRPPASAG EVFDGGVAWS
201: PAEGIRTFAG SGGAHESGGG GGAGRRAMLV CRVIAGRVRA ESDPESAADS VSLGEGELLV FDPRAVLPCF LIIYKL
001: MANGWVKSLQ CKSKAFDDVY NPIKNPNPNP SPSPKHLMSS YSCRKSTQSL KDVIETKKPK PKPKKPNPKP DKRETDPVLS PSTRIRSTGV RDRDPFLPTL
101: TELSEGHQSR NVVEIIFQTS WGPKPFSGRV EMIFKVQNGS KTLTRFEEYR EAVKARSVGK AREENARSVA DGNETMRFYC LGPSYGGGGS AWGILGGKGG
201: GASIYTFAGS STANEKAGGG KGRKAMLVCR VIAGRVTKQN ELKYDSDLRS RFDSVSGDDG ELLVFDTRAV LPCFLIIYRL
101: TELSEGHQSR NVVEIIFQTS WGPKPFSGRV EMIFKVQNGS KTLTRFEEYR EAVKARSVGK AREENARSVA DGNETMRFYC LGPSYGGGGS AWGILGGKGG
201: GASIYTFAGS STANEKAGGG KGRKAMLVCR VIAGRVTKQN ELKYDSDLRS RFDSVSGDDG ELLVFDTRAV LPCFLIIYRL
Arabidopsis Description
Sulfated surface-like glycoprotein [Source:UniProtKB/TrEMBL;Acc:Q9SXE5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.