Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY12954 | Canola | nucleus | 81.07 | 85.98 |
| Bra027038.1-P | Field mustard | cytosol, plastid | 80.71 | 85.61 |
| CDY19564 | Canola | nucleus | 80.36 | 85.23 |
| Solyc08g079010.1.1 | Tomato | cytosol | 34.29 | 60.76 |
| VIT_02s0154g00220.t01 | Wine grape | cytosol | 60.0 | 58.74 |
| KRH28045 | Soybean | mitochondrion | 58.57 | 57.54 |
| AT4G22560.1 | Thale cress | cytosol, plastid | 52.86 | 56.06 |
| KRH04088 | Soybean | cytosol | 57.5 | 55.33 |
| KRH77393 | Soybean | mitochondrion | 55.71 | 54.93 |
| KRH57359 | Soybean | cytosol | 55.71 | 54.55 |
| AT4G12450.1 | Thale cress | cytosol | 53.57 | 54.15 |
| PGSC0003DMT400012224 | Potato | nucleus | 57.14 | 53.51 |
| Os10t0554001-01 | Rice | cytosol | 30.36 | 46.7 |
| GSMUA_Achr2P10020_001 | Banana | cytosol | 44.64 | 46.64 |
| GSMUA_Achr5P15290_001 | Banana | nucleus | 40.36 | 44.49 |
| GSMUA_Achr4P30380_001 | Banana | cytosol | 44.29 | 43.82 |
| KRH37293 | Soybean | plastid | 23.93 | 43.51 |
| GSMUA_Achr7P07110_001 | Banana | cytosol | 42.5 | 43.12 |
| GSMUA_Achr4P27010_001 | Banana | plastid | 43.93 | 43.01 |
| TraesCS5A01G536800.1 | Wheat | cytosol | 29.29 | 42.71 |
| GSMUA_Achr1P01700_001 | Banana | nucleus | 43.21 | 41.02 |
| Zm00001d017504_P001 | Maize | mitochondrion | 40.71 | 38.91 |
| TraesCS6A01G248100.1 | Wheat | plastid | 38.21 | 38.63 |
| TraesCS6B01G276600.1 | Wheat | plastid | 38.57 | 38.57 |
| TraesCS6D01G230200.1 | Wheat | plastid | 38.21 | 38.21 |
| HORVU6Hr1G063400.2 | Barley | plastid | 38.21 | 38.08 |
| GSMUA_Achr5P13520_001 | Banana | cytosol, mitochondrion, peroxisome | 40.0 | 37.97 |
| KXG31078 | Sorghum | plastid | 42.14 | 37.34 |
| TraesCS1D01G214000.1 | Wheat | mitochondrion, plastid | 36.79 | 35.64 |
| TraesCS1A01G210700.1 | Wheat | mitochondrion, plastid | 37.14 | 35.49 |
| HORVU1Hr1G053950.1 | Barley | mitochondrion, plastid | 36.79 | 35.03 |
| TraesCS1B01G224700.1 | Wheat | mitochondrion, plastid | 36.43 | 34.81 |
| Zm00001d047106_P001 | Maize | plastid | 36.79 | 34.8 |
| Os02t0661600-00 | Rice | mitochondrion | 37.14 | 33.99 |
| Zm00001d029869_P001 | Maize | mitochondrion | 37.14 | 33.88 |
| TraesCS4D01G361200.1 | Wheat | plastid | 35.36 | 32.14 |
| TraesCS4B01G369900.1 | Wheat | plastid | 35.36 | 31.63 |
| KXG38947 | Sorghum | mitochondrion | 36.07 | 31.56 |
| AT4G27240.1 | Thale cress | nucleus | 35.36 | 22.97 |
| AT2G29660.1 | Thale cress | golgi, plasma membrane | 29.29 | 21.98 |
| AT1G11490.2 | Thale cress | mitochondrion | 27.14 | 20.82 |
| AT1G75710.1 | Thale cress | nucleus | 33.57 | 20.35 |
| AT5G54630.1 | Thale cress | nucleus | 34.29 | 20.34 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.90.228.10 | EntrezGene:842549 | ProteinID:AAD43609.1 | ProteinID:AEE33974.1 | ArrayExpress:AT1G62520 |
| EnsemblPlantsGene:AT1G62520 | RefSeq:AT1G62520 | TAIR:AT1G62520 | RefSeq:AT1G62520-TAIR-G | EnsemblPlants:AT1G62520.1 | TAIR:AT1G62520.1 |
| Unigene:At.36251 | EMBL:BT004150 | EMBL:BT005654 | GO:GO:0008150 | RefSeq:NP_176441.1 | PO:PO:0000293 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009046 | PO:PO:0025022 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF12 | UniProt:Q9SXE5 | SUPFAM:SSF56399 |
| UniParc:UPI000000C2AC | SEG:seg | : | : | : | : |
Description
Sulfated surface-like glycoprotein [Source:UniProtKB/TrEMBL;Acc:Q9SXE5]
Coordinates
chr1:+:23144385..23145531
Molecular Weight (calculated)
30816.8 Da
IEP (calculated)
10.351
GRAVY (calculated)
-0.651
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MANGWVKSLQ CKSKAFDDVY NPIKNPNPNP SPSPKHLMSS YSCRKSTQSL KDVIETKKPK PKPKKPNPKP DKRETDPVLS PSTRIRSTGV RDRDPFLPTL
101: TELSEGHQSR NVVEIIFQTS WGPKPFSGRV EMIFKVQNGS KTLTRFEEYR EAVKARSVGK AREENARSVA DGNETMRFYC LGPSYGGGGS AWGILGGKGG
201: GASIYTFAGS STANEKAGGG KGRKAMLVCR VIAGRVTKQN ELKYDSDLRS RFDSVSGDDG ELLVFDTRAV LPCFLIIYRL
101: TELSEGHQSR NVVEIIFQTS WGPKPFSGRV EMIFKVQNGS KTLTRFEEYR EAVKARSVGK AREENARSVA DGNETMRFYC LGPSYGGGGS AWGILGGKGG
201: GASIYTFAGS STANEKAGGG KGRKAMLVCR VIAGRVTKQN ELKYDSDLRS RFDSVSGDDG ELLVFDTRAV LPCFLIIYRL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.