Factsheet for GSMUA_Achr11P00820_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus	45.75	80.77
GSMUA_Achr8P19240_001	Banana	nucleus	73.86	80.33
PGSC0003DMT400025521	Potato	plastid	38.78	56.69
TraesCS2A01G004600.1	Wheat	nucleus	40.96	55.62
VIT_18s0001g14130.t01	Wine grape	vacuole	47.93	52.51
GSMUA_Achr6P17990_001	Banana	nucleus	28.76	51.36
Os04t0115500-00	Rice	nucleus	53.59	51.25
KRH05942	Soybean	nucleus	46.19	50.84
GSMUA_Achr11P...	Banana	cytosol	29.85	50.74
KRH17425	Soybean	nucleus	45.75	50.72
Zm00001d004497_P001	Maize	nucleus, plastid	50.54	50.54
GSMUA_Achr9P00350_001	Banana	nucleus	31.15	50.18
CDX73189	Canola	nucleus	45.75	48.95
CDY47503	Canola	nucleus	45.97	48.39
TraesCSU01G012300.1	Wheat	nucleus, plastid	50.33	47.63
TraesCS2D01G004200.1	Wheat	nucleus, plastid	50.54	47.25
Bra014094.1-P	Field mustard	plastid	42.92	47.13
CDY20903	Canola	nucleus, plastid	42.7	46.78
CDY13543	Canola	nucleus	44.01	46.76
Zm00001d024883_P001	Maize	nucleus	52.07	46.68
Solyc04g081370.2.1	Tomato	extracellular, vacuole	45.75	46.56
CDY06723	Canola	nucleus, plastid	42.27	46.3
Bra015598.1-P	Field mustard	plastid	42.27	46.3
AT1G75710.1	Thale cress	nucleus	46.19	45.89
Bra015824.1-P	Field mustard	nucleus	46.19	45.79
CDY39052	Canola	nucleus	44.44	45.74
Bra008218.1-P	Field mustard	nucleus	44.23	45.52
GSMUA_Achr6P19070_001	Banana	cytosol	13.07	45.45
EES10376	Sorghum	nucleus	52.29	44.28
GSMUA_Achr2P08150_001	Banana	nucleus, plastid	31.81	44.11
CDY16999	Canola	nucleus, plastid	39.0	43.24
CDY17799	Canola	nucleus, plastid	40.52	42.86
GSMUA_Achr8P30300_001	Banana	nucleus	35.29	41.97
GSMUA_Achr5P01120_001	Banana	nucleus, plastid	35.08	41.82
GSMUA_Achr7P19590_001	Banana	cytosol	7.41	39.53
GSMUA_Achr6P24320_001	Banana	cytosol	27.02	36.8
GSMUA_Achr7P07110_001	Banana	cytosol	22.0	36.59
GSMUA_Achr5P15290_001	Banana	nucleus	19.61	35.43
GSMUA_Achr2P10020_001	Banana	cytosol	20.48	35.07
GSMUA_AchrUn_...	Banana	cytosol	26.8	34.17
GSMUA_Achr9P29950_001	Banana	cytosol	27.45	33.6
GSMUA_Achr1P08590_001	Banana	nucleus	30.5	33.57
GSMUA_Achr9P24720_001	Banana	cytosol	26.36	33.52
GSMUA_Achr4P27010_001	Banana	plastid	20.7	33.22
GSMUA_Achr4P30380_001	Banana	cytosol	20.48	33.22
GSMUA_Achr1P01700_001	Banana	nucleus	20.91	32.54
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	25.27	31.27
GSMUA_Achr5P13520_001	Banana	cytosol, mitochondrion, peroxisome	19.61	30.51
PGSC0003DMT400076665	Potato	cytosol	10.24	29.56
GSMUA_Achr6P19060_001	Banana	nucleus	10.24	20.8

Protein Annotations

EnsemblPlants:GSMUA_Achr11P00820_001	EnsemblPlants:GSMUA_Achr11T00820_001	EnsemblPlantsGene:GSMUA_Achr11G00820_001	Gene3D:3.90.228.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR013087	InterPro:Znf_C2H2_type
PANTHER:PTHR31681	PANTHER:PTHR31681:SF20	PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SUPFAM:SSF56399
TMHMM:TMhelix	UniParc:UPI000295188B	UniProt:M0RNB3	MapMan:15.5.15	:	:

Description

ZOS4-01 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G00820_001]

Coordinates

chr11:+:522315..524437

Molecular Weight (calculated)

49836.3 Da

IEP (calculated)

9.905

GRAVY (calculated)

-0.446

Length

459 amino acids

Sequence
(BLAST)

001: MEHRDHNTTG KRIQRERERE REREIGVLMV EKRPLVLIHL LAALLLMALT SLLPAAAPTS HHHHHSDDEH ERKKKKKKPP PTPRTRTLSP PSSSSSSWEQ
101: FKSLLSCRST AATQVHDPSS TAARLGRAAC GSSICAIRDV VHGNTRTAPL ARATRSARHQ PPVSSLGCGS HSRGGIQLRK LSGCYECHAV SIEPSSRRYP
201: RPRTTLCACS ECGEVFTKPD SLELHQAIRH AVSELAPEDS GRNIVEIIFK SSWQKKDRPI CKIERILKVH SAPRTVARFE DYRAAVKSRA LPHLSSFSAS
301: GAAARHHPSR CAADGNELLR FHCTSLSCPL GARGSTSLCP NSSSSSPSSS CGVCTIIRHG FARAQYPHGV RTTASSGRAH DSGPSAAAED GRGERRAMLV
401: CRVIAGRVRR TPDDPAAEEA YDAVAVGDGC GAYGNLEELI VANPRAILPC FVVIYRAVS

Best Arabidopsis Sequence Match ( AT1G75710.1 )
(BLAST)

001: MALLTFLPEN AEAPQKHKPT SSKRKKRDNP TDQTQTQKHK PQKPKKAVPP KQPSSWDQIK NLLTCKQIEG SRVHDPSKNS QSGPSMTTNL SPSKLGSSCS
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES

Arabidopsis Description

C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9LR10]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.