Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G012300.1 | Wheat | nucleus, plastid | 95.32 | 96.49 |
| TraesCS2A01G004600.1 | Wheat | nucleus | 65.78 | 95.56 |
| Os04t0115500-00 | Rice | nucleus | 68.02 | 69.58 |
| Zm00001d004497_P001 | Maize | nucleus, plastid | 60.9 | 65.14 |
| GSMUA_Achr11P... | Banana | nucleus | 34.42 | 65.0 |
| Zm00001d024883_P001 | Maize | nucleus | 63.54 | 60.94 |
| EES10376 | Sorghum | nucleus | 66.19 | 59.96 |
| GSMUA_Achr8P19240_001 | Banana | nucleus | 46.64 | 54.27 |
| PGSC0003DMT400025521 | Potato | plastid | 32.99 | 51.59 |
| GSMUA_Achr11P... | Banana | nucleus | 47.25 | 50.54 |
| CDX73189 | Canola | nucleus | 42.16 | 48.25 |
| KRH17425 | Soybean | nucleus | 40.53 | 48.07 |
| KRH05942 | Soybean | nucleus | 40.53 | 47.72 |
| CDY47503 | Canola | nucleus | 42.36 | 47.71 |
| VIT_18s0001g14130.t01 | Wine grape | vacuole | 40.53 | 47.49 |
| CDY13543 | Canola | nucleus | 40.73 | 46.3 |
| CDY39052 | Canola | nucleus | 41.96 | 46.19 |
| AT1G75710.1 | Thale cress | nucleus | 42.97 | 45.67 |
| Bra015824.1-P | Field mustard | nucleus | 42.97 | 45.57 |
| Bra008218.1-P | Field mustard | nucleus | 41.34 | 45.52 |
| Solyc04g081370.2.1 | Tomato | extracellular, vacuole | 40.33 | 43.9 |
| Bra014094.1-P | Field mustard | plastid | 37.27 | 43.78 |
| CDY20903 | Canola | nucleus, plastid | 37.07 | 43.44 |
| CDY06723 | Canola | nucleus, plastid | 36.66 | 42.96 |
| Bra015598.1-P | Field mustard | plastid | 36.66 | 42.96 |
| CDY16999 | Canola | nucleus, plastid | 33.4 | 39.61 |
| CDY17799 | Canola | nucleus, plastid | 34.62 | 39.17 |
| TraesCS2D01G580400.1 | Wheat | nucleus | 37.07 | 36.33 |
| TraesCS4D01G108700.1 | Wheat | nucleus | 29.74 | 33.41 |
| TraesCS3D01G317900.1 | Wheat | nucleus | 30.14 | 30.77 |
| TraesCS6D01G230200.1 | Wheat | plastid | 16.9 | 29.64 |
| TraesCS1D01G214000.1 | Wheat | mitochondrion, plastid | 17.31 | 29.41 |
| TraesCS4D01G215000.1 | Wheat | golgi | 24.64 | 28.01 |
| PGSC0003DMT400076665 | Potato | cytosol | 8.96 | 27.67 |
| TraesCS4D01G361200.1 | Wheat | plastid | 17.11 | 27.27 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G004200.1 | EnsemblPlantsGene:TraesCS2D01G004200 | Gene3D:3.90.228.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF20 | PFscan:PS50157 | ScanProsite:PS00028 |
| SEG:seg | SUPFAM:SSF56399 | MapMan:15.5.15 | : | : | : |
Description
No Description!
Coordinates
chr2D:+:2492241..2495701
Molecular Weight (calculated)
51446.5 Da
IEP (calculated)
9.827
GRAVY (calculated)
-0.466
Length
491 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSALLLPS SSTTTADTSD RRRGQQPQPP PQQQNHHSKR KKKPPSLPPP LSPAPRTPGR RHLAATGTPS RKSPALAAPT AGAKARLVAG KDHRQRRSGS
101: KKAAAQKPAR PASSWEQLKS LLSCRSATAA ARVHDPAALA RGPGAGGYWG TSLCSMRDVA TVDGASSAAS VVVDHRDTAP LNRSSRRAHH SSSSSAGGGG
201: HPSSLRGLSG CYECRAINVE PVSRRYPRPR ELCPCSQCGE VFTKADSLEQ HQAVRHAVSE LGPEDSGRNI VEIIFKSSWQ KRDRPICHID RILKVRNPPR
301: TVARFEAYRD AVRARCRADA AGAGGATRAA ADGNELLRFH PAALACELGA DGSTSLCASC DDGDADGKSA AAACGVCAAI RHGFAPWAGA HPLGVRTTAS
401: SGRAHDVCGA EGPSAAAPGW RAMLVCRVIA GQVRRRDGDG EEGKEEAGPF DSVAGDDAGG AYGVLEELFV ANPRAILPCF VVVYRVDVDA Q
101: KKAAAQKPAR PASSWEQLKS LLSCRSATAA ARVHDPAALA RGPGAGGYWG TSLCSMRDVA TVDGASSAAS VVVDHRDTAP LNRSSRRAHH SSSSSAGGGG
201: HPSSLRGLSG CYECRAINVE PVSRRYPRPR ELCPCSQCGE VFTKADSLEQ HQAVRHAVSE LGPEDSGRNI VEIIFKSSWQ KRDRPICHID RILKVRNPPR
301: TVARFEAYRD AVRARCRADA AGAGGATRAA ADGNELLRFH PAALACELGA DGSTSLCASC DDGDADGKSA AAACGVCAAI RHGFAPWAGA HPLGVRTTAS
401: SGRAHDVCGA EGPSAAAPGW RAMLVCRVIA GQVRRRDGDG EEGKEEAGPF DSVAGDDAGG AYGVLEELFV ANPRAILPCF VVVYRVDVDA Q
001: MALLTFLPEN AEAPQKHKPT SSKRKKRDNP TDQTQTQKHK PQKPKKAVPP KQPSSWDQIK NLLTCKQIEG SRVHDPSKNS QSGPSMTTNL SPSKLGSSCS
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES
Arabidopsis Description
C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9LR10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.