Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH05942 | Soybean | nucleus | 93.96 | 93.29 |
| VIT_18s0001g14130.t01 | Wine grape | vacuole | 74.64 | 73.75 |
| PGSC0003DMT400025521 | Potato | plastid | 52.17 | 68.79 |
| CDX73189 | Canola | nucleus | 68.6 | 66.2 |
| GSMUA_Achr11P... | Banana | nucleus | 41.55 | 66.15 |
| CDY47503 | Canola | nucleus | 69.32 | 65.83 |
| Solyc04g081370.2.1 | Tomato | extracellular, vacuole | 70.05 | 64.3 |
| CDY13543 | Canola | nucleus | 66.67 | 63.89 |
| AT1G75710.1 | Thale cress | nucleus | 70.77 | 63.42 |
| CDY39052 | Canola | nucleus | 68.12 | 63.23 |
| Bra015824.1-P | Field mustard | nucleus | 70.29 | 62.85 |
| Bra008218.1-P | Field mustard | nucleus | 67.63 | 62.78 |
| KRH25897 | Soybean | cytosol | 22.71 | 52.81 |
| TraesCS2A01G004600.1 | Wheat | nucleus | 41.3 | 50.59 |
| GSMUA_Achr8P19240_001 | Banana | nucleus | 48.55 | 47.63 |
| KRH64726 | Soybean | nucleus | 48.07 | 46.71 |
| KRH53192 | Soybean | nucleus | 47.34 | 46.34 |
| GSMUA_Achr11P... | Banana | nucleus | 50.72 | 45.75 |
| Os04t0115500-00 | Rice | nucleus | 49.03 | 42.29 |
| TraesCSU01G012300.1 | Wheat | nucleus, plastid | 48.31 | 41.24 |
| Zm00001d004497_P001 | Maize | nucleus, plastid | 45.65 | 41.18 |
| TraesCS2D01G004200.1 | Wheat | nucleus, plastid | 48.07 | 40.53 |
| Zm00001d024883_P001 | Maize | nucleus | 47.83 | 38.67 |
| EES10376 | Sorghum | nucleus | 49.52 | 37.82 |
| KRH55605 | Soybean | cytosol | 38.89 | 36.51 |
| KRH28045 | Soybean | mitochondrion | 24.88 | 36.14 |
| KRH22216 | Soybean | cytosol, plastid | 37.92 | 35.76 |
| KRH77393 | Soybean | mitochondrion | 24.4 | 35.56 |
| KRH27121 | Soybean | cytosol, plastid | 36.96 | 35.09 |
| KRH04088 | Soybean | cytosol | 23.67 | 33.68 |
| KRH57359 | Soybean | cytosol | 23.19 | 33.57 |
| KRG98330 | Soybean | endoplasmic reticulum, golgi | 30.92 | 33.51 |
| KRH73867 | Soybean | cytosol | 11.59 | 31.79 |
| KRH10693 | Soybean | nucleus | 30.43 | 31.66 |
| KRH21644 | Soybean | nucleus | 29.71 | 30.83 |
| KRH58632 | Soybean | nucleus | 26.81 | 30.66 |
| KRH14275 | Soybean | cytosol | 18.6 | 28.84 |
| KRH37293 | Soybean | plastid | 10.63 | 28.57 |
Protein Annotations
| EMBL:ACUP02009091 | EnsemblPlants:KRH17425 | EnsemblPlantsGene:GLYMA_14G218700 | EntrezGene:100782665 | Gene3D:3.90.228.10 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_type | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF22 |
| PFscan:PS50157 | ProteinID:KRH17425 | ProteinID:KRH17425.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF56399 |
| UniParc:UPI000233B9CB | UniProt:I1MC45 | MapMan:15.5.15 | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:48385681..48389276
Molecular Weight (calculated)
45316.2 Da
IEP (calculated)
9.645
GRAVY (calculated)
-0.476
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLTSLPEQ FSSTPKRHKR KPQQQQQKQK QKQKQKQKQK PASSWDQIKN LLTCKQMEES RVHDPSKITG YSKLGSSCSS ICSFRDVVHG NTRVVHRSDN
101: SSPESSSLGQ ETNGLLTRKP VTTTTTRSAK SNGGATCTSS SSSSRGMQFR KLSGCYECHM IIDPSRLPIA RSTVCACSHC GEVFPKMESL ELHQAVRHAV
201: SELGPEDSGR NIVEIIFKSS WLKKDNPICK IERILKVHNT QRTIQRFEEC RDTVKNRALG STKKNPRCAA DGNELLRFHC TTLTCALGAR GSSSLCASVP
301: GCSVCTIIRH GFQGGCGGGG DHARAKGVRT TASSGRAHDS VVCGDATRRA MLVCRVIAGR VKRVVEDAPS EEEHVSYDSV AGYAGIYSNL EELVVFNPKA
401: ILPCFVVIYK VPLC
101: SSPESSSLGQ ETNGLLTRKP VTTTTTRSAK SNGGATCTSS SSSSRGMQFR KLSGCYECHM IIDPSRLPIA RSTVCACSHC GEVFPKMESL ELHQAVRHAV
201: SELGPEDSGR NIVEIIFKSS WLKKDNPICK IERILKVHNT QRTIQRFEEC RDTVKNRALG STKKNPRCAA DGNELLRFHC TTLTCALGAR GSSSLCASVP
301: GCSVCTIIRH GFQGGCGGGG DHARAKGVRT TASSGRAHDS VVCGDATRRA MLVCRVIAGR VKRVVEDAPS EEEHVSYDSV AGYAGIYSNL EELVVFNPKA
401: ILPCFVVIYK VPLC
001: MALLTFLPEN AEAPQKHKPT SSKRKKRDNP TDQTQTQKHK PQKPKKAVPP KQPSSWDQIK NLLTCKQIEG SRVHDPSKNS QSGPSMTTNL SPSKLGSSCS
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES
Arabidopsis Description
C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9LR10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.