CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25897	Soybean	cytosol	26.8	54.49
KRH10693	Soybean	nucleus	47.79	43.47
KRH21644	Soybean	nucleus	46.41	42.11
GSMUA_Achr6P24320_001	Banana	cytosol	30.94	33.23
KRH55605	Soybean	cytosol	39.23	32.2
AT1G11490.2	Thale cress	mitochondrion	31.49	31.23
GSMUA_Achr9P24720_001	Banana	cytosol	30.39	30.47
KRH22216	Soybean	cytosol, plastid	36.74	30.3
KRH27121	Soybean	cytosol, plastid	36.19	30.05
Bra019849.1-P	Field mustard	cytosol, mitochondrion	29.56	29.89
CDX97964	Canola	cytosol	29.56	29.8
CDY49785	Canola	cytosol	28.73	29.05
Os01t0785900-01	Rice	mitochondrion, nucleus, peroxisome, plastid	37.29	27.84
KRH05942	Soybean	nucleus	31.49	27.34
TraesCS3D01G317900.1	Wheat	nucleus	36.19	27.23
Os06t0683000-01	Rice	cytosol, nucleus, plastid	34.81	27.1
KRH17425	Soybean	nucleus	30.66	26.81
HORVU3Hr1G077490.2	Barley	nucleus	35.91	26.8
TraesCS3B01G353600.1	Wheat	nucleus	35.91	26.75
Zm00001d012605_P001	Maize	nucleus	37.02	26.75
KRH73867	Soybean	cytosol	11.05	26.49
Zm00001d043243_P001	Maize	nucleus	36.74	26.34
TraesCS3A01G324600.1	Wheat	nucleus	35.91	25.64
EES03733	Sorghum	nucleus	36.46	25.24
KRH53192	Soybean	nucleus	28.73	24.59
KRH64726	Soybean	nucleus	28.73	24.41
EER88828	Sorghum	cytosol	29.01	24.31
Zm00001d014485_P001	Maize	nucleus, plastid	29.28	24.2
KRH28045	Soybean	mitochondrion	17.96	22.81
KRG98330	Soybean	endoplasmic reticulum, golgi	23.48	22.25
KRH77393	Soybean	mitochondrion	17.13	21.83
KRH04088	Soybean	cytosol	17.4	21.65
KRH14275	Soybean	cytosol	15.75	21.35
KRH57359	Soybean	cytosol	16.57	20.98
KRH37293	Soybean	plastid	6.91	16.23

Protein Annotations

EMBL:ACUP02003277	EnsemblPlants:KRH58632	EnsemblPlantsGene:GLYMA_05G140100	EntrezGene:102660699	Gene3D:3.90.228.10	PANTHER:PTHR31681
PANTHER:PTHR31681:SF19	ProteinID:KRH58632	ProteinID:KRH58632.1	SUPFAM:SSF56399	UniParc:UPI00023C45D9	UniProt:A0A0R0K175
MapMan:15.5.15	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:33261778..33263548

Molecular Weight (calculated)

41005.0 Da

IEP (calculated)

6.894

GRAVY (calculated)

-0.539

Length

362 amino acids

Sequence
(BLAST)

001: MSEVWHLLKK SLRCKPHALE VHDPKAYSST QRKPQGKIST QRHSLEDHVS HEIFLDRSSG EIMLCPCCPC SHEGSEDGKG VQEEPHPPRS TKRIIPSSKT
101: HYVDCDECNF FSKKKVPLKK DSNDDLPIST RHHECDEKLK STDTVEEHDH NIPEHSVVQL ERDGSSCKII QQICKDNLIE SKASQIECVL RVQNKQETFA
201: CFEESRGMVR TKAERLQNEH PRCMVDGNEL LRFHGTTIAC SLGLNGSSTL CTLEQCGVCQ ILRHGFSANK EFHGALGVYT TSTSEKAIDS ICSSNKSVRR
301: MCVMLCRVIA GRIHNPLQEI KEMVEPEFDS LVKKMSDQSE IEELIVLNPR AVLPCFLVMY NF

Best Arabidopsis Sequence Match ( AT1G11490.1 )
(BLAST)

001: MRGVWLYLKK SLSCCKAQKS TVACDPDKIQ IQKKENPSGC SRRSMSNLRD VFVTNGDEGA MQNVSCCSSR SLESSRFVNT VKFEENAGYS DRFKGLLSGA
101: SSSDLLPGRC SERFDVVGSD ICGFGVLACQ KCHERVRDLD AFEAHYLSNH SVVRLLAGDF SRTTVELICN TGYSHKLGKM KGNNISAIFK IQNLQRVVAD
201: FEDYRELVKI RANKLSKKHS RCMADGNEFL GFHGTTLSCT LGFSNSSSNL CFSDHCEVCH ILRHGFSPKT RPDGIKGVLT ASTSSTALES IETDQGRNRG
301: SLIAVVLCRV IAGRVHKPMQ TFENSLGFSE FDSLALKVGQ NSRIEELYLL STKALLPCFV IIFKP

Arabidopsis Description

Uncharacterized protein At1g11490 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUU5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.