CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25897	Soybean	cytosol	38.78	96.07
KRH22216	Soybean	cytosol, plastid	87.98	88.38
KRH27121	Soybean	cytosol, plastid	86.17	87.16
VIT_19s0014g05000.t01	Wine grape	cytosol, plastid	82.77	85.08
PGSC0003DMT400049491	Potato	cytosol, nucleus, peroxisome	77.55	79.53
Solyc07g063970.2.1	Tomato	cytosol, nucleus, peroxisome	76.42	78.92
CDY29286	Canola	nucleus	65.99	70.8
CDY06635	Canola	nucleus	69.84	70.0
CDY28761	Canola	nucleus	70.75	69.8
Bra026366.1-P	Field mustard	nucleus	66.44	68.78
CDX89265	Canola	nucleus	66.44	68.62
AT4G27240.1	Thale cress	nucleus	66.44	67.98
Bra022735.1-P	Field mustard	nucleus	72.34	67.44
AT5G54630.1	Thale cress	nucleus	71.2	66.53
CDY18344	Canola	nucleus	67.35	65.56
Os01t0785900-01	Rice	mitochondrion, nucleus, peroxisome, plastid	67.35	61.24
TraesCS3D01G317900.1	Wheat	nucleus	66.44	60.91
HORVU3Hr1G077490.2	Barley	nucleus	66.21	60.21
TraesCS3B01G353600.1	Wheat	nucleus	65.99	59.88
Zm00001d043243_P001	Maize	nucleus	66.89	58.42
Zm00001d012605_P001	Maize	nucleus	65.99	58.08
TraesCS3A01G324600.1	Wheat	nucleus	65.76	57.2
EES03733	Sorghum	nucleus	67.35	56.79
Os06t0683000-01	Rice	cytosol, nucleus, plastid	53.06	50.32
KRH10693	Soybean	nucleus	40.14	44.47
Zm00001d014485_P001	Maize	nucleus, plastid	43.54	43.84
EER88828	Sorghum	cytosol	42.86	43.75
KRH21644	Soybean	nucleus	39.46	43.61
KRH58632	Soybean	nucleus	32.2	39.23
KRH17425	Soybean	nucleus	36.51	38.89
KRH05942	Soybean	nucleus	36.73	38.85
KRH73867	Soybean	cytosol	12.47	36.42
KRH64726	Soybean	nucleus	34.47	35.68
KRH53192	Soybean	nucleus	34.01	35.46
KRH28045	Soybean	mitochondrion	22.68	35.09
KRH04088	Soybean	cytosol	22.45	34.02
KRH77393	Soybean	mitochondrion	21.77	33.8
KRH57359	Soybean	cytosol	21.32	32.87
KRG98330	Soybean	endoplasmic reticulum, golgi	26.98	31.15
KRH37293	Soybean	plastid	10.66	30.52
KRH14275	Soybean	cytosol	18.37	30.34

Protein Annotations

EMBL:ACUP02004028	EMBL:BT094366	EnsemblPlants:KRH55605	EnsemblPlantsGene:GLYMA_06G265800	EntrezGene:100787790	Gene3D:3.90.228.10
GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_type	PANTHER:PTHR31681
PANTHER:PTHR31681:SF19	ProteinID:KRH55605	ProteinID:KRH55605.1	ScanProsite:PS00028	SEG:seg	SUPFAM:SSF56399
UniParc:UPI0001B15F2A	UniProt:C6TA36	MapMan:15.5.15	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:45384894..45387664

Molecular Weight (calculated)

48045.7 Da

IEP (calculated)

9.671

GRAVY (calculated)

-0.452

Length

441 amino acids

Sequence
(BLAST)

001: MEKEEKKKIK GNVKDNMPTV WFSLKKSLHC KSEPSDVHDP KTRKQLSTIL TKRAGRSGCS RSIANLKDVI HGSKRHLDKP PSCSPRSIGS SEFLNPITHE
101: VILSNSRCEL KITGYGGFQE GGVGSGGGGS NAGGGSTFVG TLRPGTPGPG GHPTMHYFNP SFRTSSTPPR KSPFLSSDKE GSGPHGAGLH SSNRLSLETD
201: SNGSSTVTCH KCGEQFNKWD AAEAHHLSKH AVTELVEGDS SRKIVEIICR TSWLKSENQC GRIERVLKVH NMQKTLARFE EYREMVKIKA SKLQKKHPRC
301: LADGNELLRF YGTTVSCSLG LNGSSSLCLS EKCCVCRIIR NGFSAKKELK GGIGVFTTST SGRAFESIDI TCEEPSLRKA LIVCRVIAGR VHRPLENIQE
401: MAAQTGFDSL AGKVGLYSNI EELYLLNPRA LLPCFVVICK P

Best Arabidopsis Sequence Match ( AT5G54630.1 )
(BLAST)

001: MEDSSKKSQK KKKNKSKNNI PTVWFSLKKS LHCKSEPSDV HDPISTTKQQ QHLSTISTKK ISGISSGGAA VCGGGLSGCS RSIANLKDVI HGSKRHFEKP
101: PISSPRSIGS NEFLNPITHE VILSNSTCEL KITGVGDMAS PVGAADSGGG GGGGNGRSTT YVGMLRPGTP MHYLNHSASY RSQTRKGSFA LSERDRGGGG
201: GGEGLGFHTN RRVSLEMNRE STINGGNNSS VSCHKCGEQF NKLEAAEAHH LSKHAVTELV EGDSSRKIVE IICRTSWLKS ENQCGRIDRV LKVHNMQKTL
301: ARFEEYRETV KIRASKLQKK HPRCLADGNE LLRFHGTTVA CGLGINGSTS VCTAEKCCVC RIIRNGFSSK REKNNGVGVF TASTSGRAFE SILVNGGDES
401: GDVDRTVRKV LIVCRVIAGR VHRPVENVEE MNGLMSGFDS LAGKVGLYTN VEELYLLNPK ALLPCFVVIC KP

Arabidopsis Description

AT5g54630/MRB17_13 [Source:UniProtKB/TrEMBL;Acc:Q9FIU1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.