CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64726	Soybean	nucleus	95.27	94.6
GSMUA_Achr11P...	Banana	cytosol	41.37	64.81
PGSC0003DMT400074652	Potato	plastid	49.17	64.6
GSMUA_Achr6P17990_001	Banana	nucleus	38.53	63.42
VIT_18s0001g02000.t01	Wine grape	nucleus, plastid	50.35	63.2
GSMUA_Achr9P00350_001	Banana	nucleus	41.61	61.75
VIT_18s0001g03670.t01	Wine grape	nucleus	69.27	59.92
Solyc11g013220.1.1	Tomato	nucleus	56.97	59.8
GSMUA_Achr2P08150_001	Banana	nucleus, plastid	45.39	58.01
GSMUA_Achr8P30300_001	Banana	nucleus	49.65	54.4
KRH25897	Soybean	cytosol	22.7	53.93
GSMUA_Achr5P01120_001	Banana	nucleus, plastid	48.23	52.99
KRH17425	Soybean	nucleus	46.34	47.34
KRH05942	Soybean	nucleus	45.63	46.28
Os11t0169400-01	Rice	nucleus	42.79	42.59
TraesCS4D01G108700.1	Wheat	nucleus	43.26	41.88
TraesCS4A01G207500.1	Wheat	nucleus	42.79	41.71
TraesCS4B01G111000.1	Wheat	nucleus	43.03	41.65
HORVU4Hr1G019890.1	Barley	nucleus	41.37	40.7
KXG27839	Sorghum	nucleus, plastid	43.26	40.67
Zm00001d053006_P001	Maize	nucleus	40.43	40.33
KRG98330	Soybean	endoplasmic reticulum, golgi	32.15	35.6
Zm00001d004822_P001	Maize	nucleus, plastid	28.84	34.96
KRH55605	Soybean	cytosol	35.46	34.01
KRH22216	Soybean	cytosol, plastid	33.81	32.57
KRH27121	Soybean	cytosol, plastid	33.1	32.11
KRH73867	Soybean	cytosol	11.11	31.13
KRH10693	Soybean	nucleus	28.61	30.4
KRH04088	Soybean	cytosol	20.8	30.24
KRH28045	Soybean	mitochondrion	20.33	30.18
KRH57359	Soybean	cytosol	20.09	29.72
KRH77393	Soybean	mitochondrion	19.86	29.58
KRH21644	Soybean	nucleus	27.9	29.57
KRH58632	Soybean	nucleus	24.59	28.73
KRH37293	Soybean	plastid	10.17	27.92
KRH14275	Soybean	cytosol	16.55	26.22

Protein Annotations

EMBL:ACUP02003453	EnsemblPlants:KRH53192	EnsemblPlantsGene:GLYMA_06G109900	EntrezGene:100814186	Gene3D:3.90.228.10	PANTHER:PTHR31681
PANTHER:PTHR31681:SF21	ProteinID:KRH53192	ProteinID:KRH53192.1	SEG:seg	SUPFAM:SSF56399	UniParc:UPI0002339739
UniProt:I1KA61	MapMan:15.5.15	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:8889371..8891703

Molecular Weight (calculated)

46432.7 Da

IEP (calculated)

9.670

GRAVY (calculated)

-0.586

Length

423 amino acids

Sequence
(BLAST)

001: MSKPKTQRKP TMTKKVSQNQ EQQKTEKQPS WVVRGLLACR NVQIQQNQQQ QKEAKPPSEA KENRKKQEQR KLQEERVPEE NSKKCKKMKC SGSLCNNTKI
101: TAKPDTATPD VHNKRLLLSG CNNNDASSRS MKAPLNELNG TVSATSSLSA SSTSSGGGSL RGMPFRRLSG CYECRMVVDP VLGFTRDPSL RSSICSCPDC
201: GEIMKAESLE HHQAVKHAVS ELGPEDTSKN IVEIIFHSSW LKKQSPVCKI DRILKVHNTQ KTITKFEEYR DSIKAKATKL SKKHPRCIAD GNELLRFHCT
301: SFNCSLGLNG SSNLCNSIPQ CNVCSIIKHG FKVTGGGAGI LTTATSGKAH DKAACVDESE EKRAMLVCRV IAGRVKKNIA EGGGMEEYDS VAAAVGAYSN
401: LDELVVSNPR AILPCFVVIY RGF

Best Arabidopsis Sequence Match ( AT1G75710.1 )
(BLAST)

001: MALLTFLPEN AEAPQKHKPT SSKRKKRDNP TDQTQTQKHK PQKPKKAVPP KQPSSWDQIK NLLTCKQIEG SRVHDPSKNS QSGPSMTTNL SPSKLGSSCS
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES

Arabidopsis Description

C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9LR10]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.