Factsheet for Zm00001d014485_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88828	Sorghum	cytosol	78.77	79.86
KRH25897	Soybean	cytosol	24.89	61.24
GSMUA_Achr6P19070_001	Banana	cytosol	17.35	57.58
Os06t0683000-01	Rice	cytosol, nucleus, plastid	52.74	49.68
GSMUA_Achr9P29950_001	Banana	cytosol	42.01	49.07
GSMUA_Achr6P24320_001	Banana	cytosol	37.67	48.96
VIT_00s1356g00010.t01	Wine grape	cytosol	42.92	48.7
GSMUA_AchrUn_...	Banana	cytosol	38.13	46.39
GSMUA_Achr1P08590_001	Banana	nucleus	42.92	45.08
GSMUA_Achr9P24720_001	Banana	cytosol	36.76	44.6
KRH22216	Soybean	cytosol, plastid	44.29	44.19
KRH27121	Soybean	cytosol, plastid	43.84	44.04
PGSC0003DMT400055929	Potato	cytosol	41.78	43.88
VIT_19s0014g05000.t01	Wine grape	cytosol, plastid	42.92	43.82
KRH55605	Soybean	cytosol	43.84	43.54
CDY29286	Canola	nucleus	40.41	43.07
PGSC0003DMT400049491	Potato	cytosol, nucleus, peroxisome	42.24	43.02
Solyc02g079920.2.1	Tomato	cytosol	41.32	42.99
Solyc07g063970.2.1	Tomato	cytosol, nucleus, peroxisome	41.78	42.86
Bra026366.1-P	Field mustard	nucleus	40.41	41.55
AT4G27240.1	Thale cress	nucleus	40.87	41.53
CDX89265	Canola	nucleus	40.41	41.45
CDY28761	Canola	nucleus	41.1	40.27
CDY06635	Canola	nucleus	40.41	40.23
CDY18344	Canola	nucleus	40.87	39.51
Zm00001d012605_P001	Maize	nucleus	44.75	39.12
AT5G54630.1	Thale cress	nucleus	42.01	38.98
Bra022735.1-P	Field mustard	nucleus	41.78	38.69
Zm00001d043243_P001	Maize	nucleus	43.15	37.43
AT1G11490.2	Thale cress	mitochondrion	30.14	36.16
Bra019849.1-P	Field mustard	cytosol, mitochondrion	29.45	36.03
CDX97964	Canola	cytosol	29.45	35.93
CDY49785	Canola	cytosol	29.22	35.75
GSMUA_Achr6P19060_001	Banana	nucleus	18.26	35.4
KRH10693	Soybean	nucleus	29.0	31.91
KRH21644	Soybean	nucleus	28.31	31.08
KRH58632	Soybean	nucleus	24.2	29.28
Zm00001d026684_P001	Maize	nucleus	25.11	26.25
Zm00001d017504_P001	Maize	mitochondrion	17.12	25.6
Zm00001d053006_P001	Maize	nucleus	23.74	24.53
Zm00001d047106_P001	Maize	plastid	16.44	24.32
Zm00001d029869_P001	Maize	mitochondrion	16.89	24.1
Zm00001d004497_P001	Maize	nucleus, plastid	22.83	21.79
Zm00001d004822_P001	Maize	nucleus, plastid	16.89	21.2
Zm00001d028537_P001	Maize	endoplasmic reticulum, plasma membrane	22.15	21.0
Zm00001d024883_P001	Maize	nucleus	23.97	20.51

Protein Annotations

EnsemblPlants:Zm00001d014485_P001	EnsemblPlants:Zm00001d014485_T001	EnsemblPlantsGene:Zm00001d014485	Gene3D:3.90.228.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_type	PANTHER:PTHR31681	PANTHER:PTHR31681:SF7	PFscan:PS50157
ProteinID:AQK66359.1	ScanProsite:PS00028	SEG:seg	SUPFAM:SSF56399	UniParc:UPI000843E4EF	UniProt:A0A1D6GTN4
MapMan:15.5.15	:	:	:	:	:

Description

zinc finger protein-related

Coordinates

chr5:-:49842078..49843394

Molecular Weight (calculated)

47106.5 Da

IEP (calculated)

8.806

GRAVY (calculated)

-0.105

Length

438 amino acids

Sequence
(BLAST)

001: MAILWWTALK KSLSCKSQDS CDVIKRDDAS RGASASARGL GLKRSFLLQP SLSLPRSGCS RSISNLRDVI HSARFQAPPA VRSKCDSPMS VESSDVLNAV
101: THDVLLAAGG PASALAASDV GAVPPYAHSP LLMRCATGAR LSQRKSPLRL GGGDLGSPIP AWAPCVEVGV RCNRCGARFP NDNALESHHL VFHAGKRHHL
201: YFCGQEFRVV VLHFMSDDGS GLRFSRAVTE VVGGETASKV VELIYSVGWP NPEAALDRVE RVVKVHSMER RVDRFKEYME EVKGRAARLP NKHPRCVADG
301: NELLQFHGTT VSCSLGSGGS HSVCTSSLCN VCRIIRHGFS ATRKSRNSGG GVFTTSTSRH ALECLQETSG VGAKHALLVC RVIAGRIHRP LEKLSQDFAV
401: QPGFDSVAGQ VGDDSSIEEL YLLNPSALLP CFVVICKD

Best Arabidopsis Sequence Match ( AT4G27240.1 )
(BLAST)

001: MEASSTRSEK KKKKKTIQRE NTDTQKKKKL PSVWFSLKKS LPCKSDVSDV HIPRSKKELA PISTKRTTTS SGGGVGGRSG CSRSIANLKD VIHGNQRHLE
101: KPLCSSPRSI GSSEFLNPIT HDVIFSNSTC ELKITAAGAT EFVGNLRPGT PVNYSSSRRS QTSRKASSLD REGLGFHQSR RENDREAAIN GDNSSVSCHK
201: CGEKFSKLEA AEAHHLTKHA VTELMEGDSS RRIVEIICRT SWLKTENQGG RIDRILKVHN MQKTLARFEE YRDTVKIRAS KLQKKHPRCI ADGNELLRFH
301: GTTVACALGI NGSTSLCSSE KCCVCRIIRN GFSAKREMNN GIGVFTASTS ERAFESIVIG DGGGGDRKAL IVCRVIAGRV HRPVENVEEM GGLLSGFDSL
401: AGKVGLYTNV EELYLLNSRA LLPCFVLICK P

Arabidopsis Description

At4g27240 [Source:UniProtKB/TrEMBL;Acc:O81827]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.