Factsheet for Bra015598.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06723	Canola	nucleus, plastid	99.28	99.28
Bra014094.1-P	Field mustard	plastid	87.35	87.56
PGSC0003DMT400025521	Potato	plastid	47.02	62.74
GSMUA_Achr11P...	Banana	nucleus	38.19	61.54
Bra008218.1-P	Field mustard	nucleus	62.05	58.3
Bra015824.1-P	Field mustard	nucleus	63.25	57.24
Solyc04g081370.2.1	Tomato	extracellular, vacuole	59.9	55.65
TraesCS2A01G004600.1	Wheat	nucleus	37.95	47.04
GSMUA_Achr8P19240_001	Banana	nucleus	45.35	45.02
GSMUA_Achr11P...	Banana	nucleus	46.3	42.27
Os04t0115500-00	Rice	nucleus	45.35	39.58
Zm00001d004497_P001	Maize	nucleus, plastid	42.96	39.22
TraesCSU01G012300.1	Wheat	nucleus, plastid	43.2	37.32
TraesCS2D01G004200.1	Wheat	nucleus, plastid	42.96	36.66
Zm00001d024883_P001	Maize	nucleus	44.63	36.52
EES10376	Sorghum	nucleus	45.58	35.24
Bra026366.1-P	Field mustard	nucleus	35.56	34.98
Bra020842.1-P	Field mustard	cytosol	21.0	34.11
Bra022735.1-P	Field mustard	nucleus	36.04	31.92
Bra039993.1-P	Field mustard	extracellular, golgi, plastid	28.16	31.72
Bra018369.1-P	Field mustard	extracellular, golgi, plastid	28.4	31.57
Bra019849.1-P	Field mustard	cytosol, mitochondrion	26.97	31.56
Bra027038.1-P	Field mustard	cytosol, plastid	19.81	31.44
Bra029455.1-P	Field mustard	cytosol	20.76	31.3

Protein Annotations

EnsemblPlants:Bra015598.1	EnsemblPlants:Bra015598.1-P	EnsemblPlantsGene:Bra015598	Gene3D:3.90.228.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	InterPro:IPR013087	InterPro:Znf_C2H2_type	PANTHER:PTHR31681	PANTHER:PTHR31681:SF22	PFscan:PS50157
ScanProsite:PS00028	SEG:seg	SUPFAM:SSF56399	UniParc:UPI0002544BC0	UniProt:M4DGH4	MapMan:15.5.15

Description

AT1G75710 (E=1e-113) | zinc finger (C2H2 type) family protein

Coordinates

chrA10:-:731273..733583

Molecular Weight (calculated)

45896.6 Da

IEP (calculated)

9.934

GRAVY (calculated)

-0.492

Length

419 amino acids

Sequence
(BLAST)

001: MAPLPFLPAQ TKSQTRLSSD SKKKNGNKKT STQPPQTQTL KQTQKLKQKT VSSSSSSSWS QIKNLLSCKQ IEGPRVHDPS KITLSSCGSS LCKFSDVIYG
101: NARVIHRSDH SPESSNLGQD GGLLIRKPAS RGSSSTVRSN GCGAYTSSSK AMHFRKLSGC YECHMIVDPS RYPISPRIFA CPQCGEVFPK LETLEIHQAV
201: RHAVSELGQE DSGRNIVDII FKSSWLRKDG PLYKIERILK VHNTQRTIQR FEDCRDAVKS HAHASTRKEP RSAADGNELL RFHCTTVSCS LGSRGSTSLC
301: SNIPGCRVCT IIRHGFHAKT LRLGSGSNEI KGVRTTASSG RAHDALRCFD QRRAMLVCRV IAGRVRRGQS DAPEDENDSC SYDSVAGAAG IYTNVDDLAV
401: LNPKAILPCF VVIYKVSEP

Best Arabidopsis Sequence Match ( AT1G75710.1 )
(BLAST)

001: MALLTFLPEN AEAPQKHKPT SSKRKKRDNP TDQTQTQKHK PQKPKKAVPP KQPSSWDQIK NLLTCKQIEG SRVHDPSKNS QSGPSMTTNL SPSKLGSSCS
101: SICSFRDVAH GNTRVVHRAD HSPDVGNSAT PNSETRLLTR KPGQHGSSSS RSLTSGSTRS NASGSYTSSS TTSFRAMQFR KLSGCYECHM IVDPSRYPIS
201: PRVCACSQCG EVFPKLESLE LHQAVRHAVS ELGPEDSGRN IVEIIFKSSW LKKDSPICQI ERILKVHNTQ RTIQRFEDCR DAVKARALQA TRKDARCAAD
301: GNELLRFHCT TLTCSLGARG SSSLCSNLPV CGVCTVIRHG FQGKSGGGGA NVANAGVRTT ASSGRADDLL RCSDDARRVM LVCRVIAGRV KRVDLPAADA
401: SATAEKKSTV EDNSVVGVSS SGGTFDSVAV NAGVYSNLEE LVVYNPRAIL PCFVVIYKVL ES

Arabidopsis Description

C2H2-like zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9LR10]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.