Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76365 | Canola | cytosol | 100.0 | 100.0 |
| AT4G22560.1 | Thale cress | cytosol, plastid | 82.17 | 80.3 |
| Bra029455.1-P | Field mustard | cytosol | 74.42 | 69.06 |
| Solyc08g079010.1.1 | Tomato | cytosol | 35.27 | 57.59 |
| VIT_02s0154g00220.t01 | Wine grape | cytosol | 56.98 | 51.4 |
| Bra027038.1-P | Field mustard | cytosol, plastid | 52.33 | 51.14 |
| PGSC0003DMT400012224 | Potato | nucleus | 56.2 | 48.49 |
| KRH28045 | Soybean | mitochondrion | 53.49 | 48.42 |
| KRH77393 | Soybean | mitochondrion | 51.94 | 47.18 |
| KRH04088 | Soybean | cytosol | 53.1 | 47.08 |
| KRH57359 | Soybean | cytosol | 51.16 | 46.15 |
| Os10t0554001-01 | Rice | cytosol | 31.78 | 45.05 |
| GSMUA_Achr5P15290_001 | Banana | nucleus | 43.02 | 43.7 |
| GSMUA_Achr4P27010_001 | Banana | plastid | 47.67 | 43.01 |
| GSMUA_Achr1P01700_001 | Banana | nucleus | 48.45 | 42.37 |
| TraesCS5A01G536800.1 | Wheat | cytosol | 31.4 | 42.19 |
| GSMUA_Achr2P10020_001 | Banana | cytosol | 43.8 | 42.16 |
| GSMUA_Achr7P07110_001 | Banana | cytosol | 44.57 | 41.67 |
| GSMUA_Achr4P30380_001 | Banana | cytosol | 43.41 | 39.58 |
| GSMUA_Achr5P13520_001 | Banana | cytosol, mitochondrion, peroxisome | 43.8 | 38.31 |
| TraesCS6A01G248100.1 | Wheat | plastid | 40.7 | 37.91 |
| Zm00001d017504_P001 | Maize | mitochondrion | 42.64 | 37.54 |
| TraesCS6B01G276600.1 | Wheat | plastid | 40.7 | 37.5 |
| TraesCS6D01G230200.1 | Wheat | plastid | 40.7 | 37.5 |
| HORVU6Hr1G063400.2 | Barley | plastid | 40.31 | 37.01 |
| KRH37293 | Soybean | plastid | 21.71 | 36.36 |
| KXG31078 | Sorghum | plastid | 41.86 | 34.18 |
| Os02t0661600-00 | Rice | mitochondrion | 39.53 | 33.33 |
| Zm00001d047106_P001 | Maize | plastid | 37.21 | 32.43 |
| TraesCS1D01G214000.1 | Wheat | mitochondrion, plastid | 35.66 | 31.83 |
| HORVU1Hr1G053950.1 | Barley | mitochondrion, plastid | 36.05 | 31.63 |
| TraesCS1A01G210700.1 | Wheat | mitochondrion, plastid | 35.66 | 31.4 |
| TraesCS1B01G224700.1 | Wheat | mitochondrion, plastid | 35.27 | 31.06 |
| Zm00001d029869_P001 | Maize | mitochondrion | 36.43 | 30.62 |
| KXG38947 | Sorghum | mitochondrion | 37.21 | 30.0 |
| TraesCS4D01G361200.1 | Wheat | plastid | 35.66 | 29.87 |
| TraesCS4B01G369900.1 | Wheat | plastid | 35.27 | 29.07 |
| Bra026366.1-P | Field mustard | nucleus | 36.43 | 22.07 |
| Bra014094.1-P | Field mustard | plastid | 34.88 | 21.53 |
| Bra019849.1-P | Field mustard | cytosol, mitochondrion | 29.84 | 21.51 |
| Bra039993.1-P | Field mustard | extracellular, golgi, plastid | 31.01 | 21.51 |
| Bra015598.1-P | Field mustard | plastid | 34.11 | 21.0 |
| Bra018369.1-P | Field mustard | extracellular, golgi, plastid | 30.23 | 20.69 |
| Bra008218.1-P | Field mustard | nucleus | 34.88 | 20.18 |
| Bra015824.1-P | Field mustard | nucleus | 36.05 | 20.09 |
| Bra022735.1-P | Field mustard | nucleus | 36.82 | 20.08 |
Protein Annotations
| EnsemblPlants:Bra020842.1 | EnsemblPlants:Bra020842.1-P | EnsemblPlantsGene:Bra020842 | Gene3D:3.90.228.10 | PANTHER:PTHR31681 | PANTHER:PTHR31681:SF12 |
| SEG:seg | SUPFAM:SSF56399 | UniParc:UPI0002545E11 | UniProt:M4DWE8 | MapMan:15.5.15 | : |
Description
AT4G22560 (E=9e-099) | unknown protein
Coordinates
chrA08:+:11740463..11741239
Molecular Weight (calculated)
28564.8 Da
IEP (calculated)
8.962
GRAVY (calculated)
-0.515
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNGWIKFTS LHCKSKAFDD VYDFNSYSCR KSSHCSKDVI DTRIGKKNLK PDPKLRRLKS CRAEPELNPP TRTRRSKSAR TSDALTELPD GHPSRNVVEI
101: IFQSSWSPDE FPSRVEMIYK VENGSRTVTR FEEYREVVKS RAGIKGDREG TCEEDVRCLA DGNEMMRFYP LPDGVNGGAW AFSGGKSQAV CTFSSSGEAH
201: ASGGGGGGRR AMLICRVIAG QVANRVGFGS DSVAGRDGEL YVFDTRAVLP CFLLIFRL
101: IFQSSWSPDE FPSRVEMIYK VENGSRTVTR FEEYREVVKS RAGIKGDREG TCEEDVRCLA DGNEMMRFYP LPDGVNGGAW AFSGGKSQAV CTFSSSGEAH
201: ASGGGGGGRR AMLICRVIAG QVANRVGFGS DSVAGRDGEL YVFDTRAVLP CFLLIFRL
001: MPNGWIKSLQ CKSKAFDDVY NFNSKSLMSS SSYNCSRKSS HCVKDVIDTR LSKKNQKPDP NLRRFKSCRT ETELLNPPNR TRRSKSARTS DALTELPDGH
101: PSRNVVEIIF HSSWSSDEFP GRIEMIFKVE HGSRTVTRFE EYREVVKSRA GFNGGTCEEE DARCLADGNE MMRFYPVLDG FNGGACVFAG GKGQAVCTFS
201: GSGEAYVSSG GGGGRKAMMI CRVIAGRVDD VIGFGSDSVA GRDGELFVFD TRAVLPCFLI IFRL
101: PSRNVVEIIF HSSWSSDEFP GRIEMIFKVE HGSRTVTRFE EYREVVKSRA GFNGGTCEEE DARCLADGNE MMRFYPVLDG FNGGACVFAG GKGQAVCTFS
201: GSGEAYVSSG GGGGRKAMMI CRVIAGRVDD VIGFGSDSVA GRDGELFVFD TRAVLPCFLI IFRL
Arabidopsis Description
Sulfated surface-like glycoprotein [Source:UniProtKB/TrEMBL;Acc:Q9SUW3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.