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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • cytosol 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
TargetP:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7A01G166700.1 Wheat cytosol 57.23 80.17
HORVU7Hr1G034840.14 Barley cytosol 58.46 78.19
TraesCS7B01G071300.1 Wheat cytosol, extracellular, mitochondrion, plastid 62.15 70.38
TraesCS7B01G071000.1 Wheat cytosol, extracellular, mitochondrion, plastid 61.23 69.1
TraesCS7D01G167300.1 Wheat plastid 61.23 68.62
KXG19560 Sorghum cytosol 62.46 66.78
Os03t0175600-01 Rice mitochondrion 49.54 51.94
PGSC0003DMT400013266 Potato plastid 43.38 46.23
Solyc06g064880.2.1 Tomato plastid 43.38 46.23
PGSC0003DMT400013262 Potato plastid 32.0 45.41
Os12t0502500-01 Rice plastid 22.46 22.6
Os02t0533900-01 Rice plasma membrane 18.77 20.27
Os07t0485100-01 Rice cytoskeleton, cytosol, peroxisome 17.85 14.04
Protein Annotations
EnsemblPlants:Os06t0206000-00EnsemblPlantsGene:Os06g0206000Gene3D:3.60.110.10GO:GO:0006807GO:GO:0008150GO:GO:0008152
InterPro:C-N_HydrolaseInterPro:C-N_Hydrolase_sfInterPro:IPR003010InterPro:IPR036526PANTHER:PTHR23088PANTHER:PTHR23088:SF23
PFAM:PF00795PFscan:PS50263ProteinID:BAS96696.1SEG:segSUPFAM:SSF56317UniParc:UPI000393C116
UniProt:A0A0P0WU26MapMan:4.1.2.1.4::::
Description
CARBAMOYLPUTRESCINE AMIDASE 3Similar to carbon-nitrogen hydrolase family protein. (Os06t0206000-00)
Coordinates
chr6:+:5356602..5358952
Molecular Weight (calculated)
36198.3 Da
IEP (calculated)
7.999
GRAVY (calculated)
-0.347
Length
325 amino acids
Sequence
(BLAST)
001: AERAKLACAH SVLAFCSTRS RCCSCRCRRA RRRTSPARAP ASTPPPPPAP RSSSSRQIWN CPYSMETLPS HGEDIDGGAS PSVSMLSEVA ARRRITIVGG
101: SIPERSSGRL FNTCCVIGPD GQIKAKHRKL HLFEIDIPGD ITFRESDTFT AGQEPTIVDT DVGRIGIGIC HDIRFPELAM LYRSRGAHLI CYPSAFNMST
201: GQLLWDLMQK SRKFSWFQLF VVTCSPARDP NAESDYMIWG HSSLIGPFGE VIATAGHEEA TVVGEIDHSM IQTIRDNLPL EMQRREDLYS THWLMSGENL
301: QATRHAPLDQ MHNCNEVKMA LQPWK
Best Arabidopsis Sequence Match ( AT5G12040.1 )
(BLAST)
001: MKSAISSSLF FNSKNLLNPN PLSRFISLKS NFLPKLSPRS ITSHTLKLPS SSTSALRSIS SSMASSFNPE QARVPSALPL PAPPLTKFNI GLCQLSVTSD
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK
Arabidopsis Description
NLP3Omega-amidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RUF8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.