CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G166700.1	Wheat	cytosol	63.16	82.76
HORVU7Hr1G034840.14	Barley	cytosol	66.12	82.72
TraesCS7D01G167300.1	Wheat	plastid	76.32	80.0
TraesCS7B01G071300.1	Wheat	cytosol, extracellular, mitochondrion, plastid	75.33	79.79
TraesCS7B01G071000.1	Wheat	cytosol, extracellular, mitochondrion, plastid	75.0	79.17
Os06t0206000-00	Rice	cytosol, mitochondrion, plastid	66.78	62.46
PGSC0003DMT400013266	Potato	plastid	51.97	51.8
Solyc06g064880.2.1	Tomato	plastid	51.32	51.15
PGSC0003DMT400013262	Potato	plastid	37.5	49.78
KXG40066	Sorghum	plastid	57.24	49.29
EES05187	Sorghum	cytosol	24.01	24.5
EES16018	Sorghum	plastid	26.32	24.32
EER99388	Sorghum	cytoskeleton, cytosol, peroxisome	22.7	16.71

Protein Annotations

Gene3D:3.60.110.10	MapMan:4.1.2.1.4	UniProt:A0A194YIY5	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016810
InterPro:IPR003010	InterPro:IPR036526	EnsemblPlants:KXG19560	ProteinID:KXG19560	ProteinID:KXG19560.1	PFAM:PF00795
PFscan:PS50263	PANTHER:PTHR23088	PANTHER:PTHR23088:SF23	EnsemblPlantsGene:SORBI_3010G077400	SUPFAM:SSF56317	UniParc:UPI0007F26BC6
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:6451466..6454042

Molecular Weight (calculated)

32967.8 Da

IEP (calculated)

5.058

GRAVY (calculated)

-0.004

Length

304 amino acids

Sequence
(BLAST)

001: MVCSLVCDQH KVALCQLAVT PDKDGNIARA RARVEAAADA GAKLVVLPEI WSCSYAMETL ASYAEDIDGG ESPSISMLSE VAAAKKITIV GGSIPEKASG
101: KMFNTCCVIG PDGKILAKHR KLHLFEIDIP GDITLKESDT FTGGQETTIV DTDVGRIGIG ICHDIRFPEL AMLYRSKGAH LICYPSAFNM STGELLWDLM
201: QKSRAVDNQL FVATCSPARD PNVNSDYMIW GHSSLIGPFG EVLAAAGHEE ATVIGEMDLT TIQSTRENLP LEMQRRGDLY RLIDVLVNDS MKSRSDKLCL
301: KMPA

Best Arabidopsis Sequence Match ( AT5G12040.1 )
(BLAST)

001: MKSAISSSLF FNSKNLLNPN PLSRFISLKS NFLPKLSPRS ITSHTLKLPS SSTSALRSIS SSMASSFNPE QARVPSALPL PAPPLTKFNI GLCQLSVTSD
101: KKRNISHAKK AIEEAASKGA KLVLLPEIWN SPYSNDSFPV YAEEIDAGGD ASPSTAMLSE VSKRLKITII GGSIPERVGD RLYNTCCVFG SDGELKAKHR
201: KIHLFDIDIP GKITFMESKT LTAGETPTIV DTDVGRIGIG ICYDIRFQEL AMIYAARGAH LLCYPGAFNM TTGPLHWELL QRARATDNQL YVATCSPARD
301: SGAGYTAWGH STLVGPFGEV LATTEHEEAI IIAEIDYSIL EQRRTSLPLN RQRRGDLYQL VDVQRLDSK

Arabidopsis Description

NLP3Omega-amidase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RUF8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.