CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 2
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016704_P001	Maize	extracellular	97.65	97.0
Os02t0533900-01	Rice	plasma membrane	93.29	92.36
TraesCS5A01G024500.1	Wheat	cytosol	92.28	91.67
TraesCS5D01G031200.1	Wheat	golgi	91.95	91.03
TraesCS5B01G022300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	91.95	91.03
HORVU5Hr1G006730.1	Barley	cytosol, mitochondrion	91.95	91.03
GSMUA_Achr6P19390_001	Banana	cytosol	79.53	84.95
PGSC0003DMT400067716	Potato	cytosol	80.87	80.33
Solyc11g068540.1.1	Tomato	endoplasmic reticulum, extracellular	80.54	80.0
KRH42198	Soybean	cytosol	80.2	79.93
VIT_06s0080g00560.t01	Wine grape	cytosol	79.19	79.46
KRH26651	Soybean	cytosol	79.53	79.26
KRH22668	Soybean	cytosol	79.19	78.93
CDY30547	Canola	cytosol	78.52	78.79
Bra034353.1-P	Field mustard	cytosol	78.52	78.79
CDX77117	Canola	cytosol	78.19	77.93
AT2G27450.2	Thale cress	cytosol	78.19	71.47
Bra012018.1-P	Field mustard	cytosol	16.78	64.1
CDX71452	Canola	plastid	29.19	39.37
KXG19560	Sorghum	cytosol	24.5	24.01
KXG40066	Sorghum	plastid	26.17	22.1
EER99388	Sorghum	cytoskeleton, cytosol, peroxisome	29.53	21.31
EES16018	Sorghum	plastid	23.15	20.97

Protein Annotations

KEGG:00330+3.5.1.53	Gene3D:3.60.110.10	MapMan:8.1.1.3	EntrezGene:8059630	InterPro:C-N_Hydrolase	InterPro:C-N_Hydrolase_sf
UniProt:C5XTG0	EnsemblPlants:EES05187	ProteinID:EES05187	ProteinID:EES05187.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006596	GO:GO:0006807	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016787	GO:GO:0016810	GO:GO:0050126	InterPro:IPR003010	InterPro:IPR036526	InterPro:N-carbamoylputrescine_amidase
PFAM:PF00795	PFscan:PS50263	PANTHER:PTHR43674	PANTHER:PTHR43674:SF3	MetaCyc:PWY-43	EnsemblPlantsGene:SORBI_3004G166500
SUPFAM:SSF56317	unigene:Sbi.10540	TIGRFAMs:TIGR03381	UniParc:UPI0001A856F8	RefSeq:XP_002452211.1	SEG:seg

Description

hypothetical protein

Coordinates

chr4:+:51605159..51609626

Molecular Weight (calculated)

33321.7 Da

IEP (calculated)

6.319

GRAVY (calculated)

-0.305

Length

298 amino acids

Sequence
(BLAST)

001: MAAAAGRKVA VAAVQFACTD VEAENVATAE RLIREAHKKG AKIVLIQELF EGHYFCQAQR MDFFRRAKPY KGNPTIIRMQ QLAKELEVVI PVSFFEEANN
101: AHYNSVAIID ADGTDLGLYR KSHIPDGPGY QEKFYFNPGD TGFKAFKTKY ATIGVGICWD QWFPECARAM ALQGAEILFY PTAIGSEPQD GNLDSREHWK
201: RVMQGHAGAN LVPLVASNRI GRETVETEHG KSTITFYGNS FIAGPTGEIV KLANDKDEEV LVAEFDLDEI KSIRHGWGIF RDRRPELYKV LLTLDGEK

Best Arabidopsis Sequence Match ( AT2G27450.1 )
(BLAST)

001: METEGRRREV VVSSLQFACS DDISTNVAAA ERLVREAHAK GANIILIQEL FEGYYFCQAQ REDFFKRAKP YKNHPTIARM QKLAKELGVV IPVSFFEEAN
101: TAHYNSIAII DADGTDLGIY RKSHIPDGPG YQEKFYFNPG DTGFKVFQTK FAKIGVAICW DQWFPEAARA MVLQGAEILF YPTAIGSEPQ DQGLDSRDHW
201: RRVMQGHAGA NVVPLVASNR IGKEIIETEH GPSQITFYGT SFIAGPTGEI VAEADDKSEA VLVAQFDLDM IKSKRQSWGV FRDRRPDLYK VLLTMDGNL

Arabidopsis Description

CPAN-carbamoylputrescine amidase [Source:UniProtKB/Swiss-Prot;Acc:Q8VYF5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.